Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 3.4e-71 271.6 137 100.0
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 2.3e-67 258.8 137 96.4
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 3.7e-57 224.9 141 80.9
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 9.3e-53 210.3 143 76.9
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 1.9e-50 202.6 141 75.9
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 5.7e-50 201.1 135 74.8
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 7.4e-50 200.7 139 71.2
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 2.2e-49 199.1 139 74.8
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 6.3e-49 197.6 145 72.4
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 6.3e-49 197.6 138 73.2
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.4e-48 196.4 136 74.3
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 1.8e-48 196.1 131 75.6
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.4e-48 195.7 136 72.8
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.4e-48 195.7 136 74.3
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 5.3e-48 194.5 143 72.0
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 1.5e-47 193.0 132 72.0
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 2.0e-47 192.6 132 75.0
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 3.4e-47 191.8 145 71.0
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.0e-46 190.3 134 74.6
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 1.0e-46 190.3 122 77.9
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.3e-46 189.9 143 72.7
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 1.7e-46 189.5 137 72.3
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 2.2e-46 189.1 135 73.3
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 3.8e-46 188.3 143 72.0
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 3.8e-46 188.3 136 68.4
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 5.0e-46 188.0 141 68.8
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 5.0e-46 188.0 141 68.8
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 5.0e-46 188.0 137 71.5
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 6.5e-46 187.6 144 70.1
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 8.5e-46 187.2 123 74.8
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 1.1e-45 186.8 135 72.6
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 1.9e-45 186.0 123 74.0
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.5e-45 185.7 143 69.9
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 3.2e-45 185.3 133 70.7
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 4.2e-45 184.9 124 76.6
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 5.5e-45 184.5 135 73.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 7.2e-45 184.1 124 73.4
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 9.4e-45 183.7 135 72.6
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 3.0e-43 178.7 137 69.3
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 5.1e-43 177.9 130 70.8
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 2.0e-42 176.0 113 77.0
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 2.5e-42 175.6 143 68.5
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 2.5e-42 175.6 138 67.4
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 7.4e-42 174.1 122 72.1
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 7.4e-42 174.1 136 68.4
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 2.2e-41 172.6 101 83.2
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.2e-41 172.6 95 86.3
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 3.7e-41 171.8 133 69.9
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 4.8e-41 171.4 106 80.2
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 4.8e-41 171.4 111 76.6
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 6.3e-41 171.0 134 69.4
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 1.4e-40 169.9 136 67.6
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 9.1e-40 167.2 133 63.2
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.6e-39 165.6 144 63.9
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 5.9e-39 164.5 144 60.4
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 5.9e-39 164.5 109 72.5
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 5.9e-39 164.5 130 68.5
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 7.7e-39 164.1 118 69.5
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 1.7e-38 162.9 121 71.1
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.9e-38 162.2 113 70.8
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.8e-38 161.8 145 60.0
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 6.5e-38 161.0 109 72.5
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 6.5e-38 161.0 141 61.7
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.1e-37 160.2 101 78.2
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 2.5e-37 159.1 119 70.6
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.5e-37 159.1 113 71.7
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 7.2e-37 157.5 106 75.5
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 7.2e-37 157.5 109 71.6
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 7.2e-37 157.5 109 71.6
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 9.4e-37 157.1 124 68.5
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 9.4e-37 157.1 145 58.6
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 1.2e-36 156.8 139 61.9
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 2.7e-36 155.6 109 70.6
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 2.7e-36 155.6 108 71.3
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 4.7e-36 154.8 119 68.9
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 7.9e-36 154.1 100 76.0
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 7.9e-36 154.1 94 75.5
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 1.4e-35 153.3 125 65.6
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 3.0e-35 152.1 131 60.3
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.9e-35 151.8 149 59.1
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 5.1e-35 151.4 107 69.2
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 6.7e-35 151.0 108 71.3
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 8.8e-35 150.6 104 73.1
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 2.0e-34 149.4 137 55.5
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 1.3e-33 146.7 117 61.5
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 3.7e-33 145.2 95 72.6
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 2.4e-32 142.5 120 66.7
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 9.1e-32 140.6 112 66.1
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 1.2e-31 140.2 93 66.7
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 4.5e-31 138.3 82 81.7
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 4.5e-31 138.3 116 65.5
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 5.0e-30 134.8 107 66.4
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 4.7e-28 128.3 105 58.1
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 3.9e-27 125.2 80 73.8
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 5.2e-27 124.8 81 71.6
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 1.5e-26 123.2 86 67.4
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 1.5e-26 123.2 92 59.8
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 2.0e-26 122.9 63 87.3
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 6.3e-25 117.9 93 68.8
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 5.3e-24 114.8 92 58.7
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 5.9e-23 111.3 63 77.8
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 4.7e-20 101.7 103 52.4
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 5.9e-15 84.7 52 75.0
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 4.2e-13 78.6 54 64.8
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 9.4e-13 77.4 104 44.2
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 1.6e-12 76.6 109 45.9
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 2.7e-12 75.9 74 62.2


User provided reference genes

Program Settings