Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 6.8e-65 250.4 114 100.0
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 5.2e-49 197.6 114 78.9
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 7.5e-48 193.7 114 73.7
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 6.4e-47 190.7 112 73.2
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.6e-45 186.0 114 72.8
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.6e-45 186.0 114 71.9
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 1.0e-44 183.3 114 71.9
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 1.3e-44 183.0 114 70.2
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 3.0e-44 181.8 113 72.6
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 5.0e-44 181.0 114 70.2
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 5.0e-44 181.0 114 71.9
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 8.6e-44 180.3 114 68.4
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 1.1e-43 179.9 114 72.8
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 1.1e-43 179.9 114 67.5
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 1.9e-43 179.1 114 68.4
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 3.3e-43 178.3 115 71.3
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 7.3e-43 177.2 114 68.4
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 1.2e-42 176.4 115 68.7
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 1.6e-42 176.0 114 70.2
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 6.2e-42 174.1 115 69.6
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 6.2e-42 174.1 114 67.5
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 1.4e-41 172.9 114 68.4
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 1.4e-41 172.9 114 65.8
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 1.4e-41 172.9 114 65.8
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 2.3e-41 172.2 114 65.8
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 2.3e-41 172.2 114 64.0
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 2.3e-41 172.2 114 65.8
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 3.1e-41 171.8 114 64.9
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 3.1e-41 171.8 117 65.8
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 3.1e-41 171.8 114 68.4
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 5.2e-41 171.0 114 71.1
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 6.8e-41 170.6 114 65.8
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 6.8e-41 170.6 119 63.9
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 6.8e-41 170.6 114 67.5
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 1.2e-40 169.9 114 69.3
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 1.2e-40 169.9 114 64.9
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.2e-40 169.9 113 68.1
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 2.6e-40 168.7 104 70.2
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 3.4e-40 168.3 114 67.5
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 4.4e-40 167.9 119 64.7
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 5.8e-40 167.5 104 70.2
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 1.3e-39 166.4 114 64.9
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 2.2e-39 165.6 114 61.4
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 2.2e-39 165.6 114 64.0
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 2.2e-39 165.6 118 63.6
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 2.9e-39 165.2 114 64.0
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 2.9e-39 165.2 113 67.3
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 3.7e-39 164.9 114 64.9
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 3.7e-39 164.9 114 65.8
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 4.9e-39 164.5 114 64.9
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 4.9e-39 164.5 114 68.4
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 6.4e-39 164.1 114 64.0
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 8.3e-39 163.7 114 63.2
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 8.3e-39 163.7 115 63.5
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 8.3e-39 163.7 114 61.4
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.1e-38 163.3 114 64.0
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 1.1e-38 163.3 114 64.0
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 1.9e-38 162.5 114 64.9
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 2.4e-38 162.2 114 66.7
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 5.4e-38 161.0 110 65.5
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 9.2e-38 160.2 114 59.6
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 2.1e-37 159.1 114 64.0
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 3.5e-37 158.3 114 63.2
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 4.6e-37 157.9 107 64.5
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 4.6e-37 157.9 114 64.0
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 6.0e-37 157.5 115 57.4
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.3e-36 156.4 114 60.5
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 1.7e-36 156.0 114 63.2
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 1.7e-36 156.0 114 63.2
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 2.3e-36 155.6 105 64.8
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 3.0e-36 155.2 114 63.2
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 6.6e-36 154.1 114 62.3
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 1.5e-35 152.9 114 59.6
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 9.5e-35 150.2 114 56.1
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 2.8e-34 148.7 114 58.8
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.8e-33 146.0 90 71.1
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 6.8e-33 144.1 114 55.3
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 6.8e-33 144.1 114 55.3
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 8.9e-33 143.7 119 54.6
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.5e-32 142.9 100 63.0
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 3.8e-31 138.3 108 57.4
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 3.8e-31 138.3 115 55.7
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.1e-30 134.8 113 56.6
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 6.0e-29 131.0 100 52.0
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 1.9e-27 125.9 115 53.0
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 3.1e-25 118.6 113 44.2
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 4.6e-21 104.8 123 43.1
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.0e-20 103.6 119 38.7
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 3.0e-20 102.1 73 60.3
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 6.2e-18 94.4 84 51.2
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 8.7e-12 73.9 67 49.3
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.1e-11 73.6 90 37.8
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.1e-10 69.3 35 82.9
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 2.8e-10 68.9 114 36.0
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 6.2e-10 67.8 73 43.8
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.7e-07 59.7 42 61.9


User provided reference genes

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