Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.7e-190 669.1 322 100.0
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 2.1e-172 609.0 322 90.7
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 2.6e-162 575.5 323 84.2
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.4e-152 543.1 322 84.2
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.3e-145 520.0 328 75.0
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.6e-143 513.1 327 73.4
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 2.1e-143 512.7 328 72.9
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 4.6e-143 511.5 328 73.2
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.0e-142 510.4 326 73.3
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 3.9e-142 508.4 328 73.2
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 5.1e-142 508.1 328 71.6
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 5.1e-142 508.1 328 71.6
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 8.7e-142 507.3 328 72.9
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 8.7e-142 507.3 328 71.6
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.5e-141 506.5 326 73.0
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.9e-141 506.1 326 72.7
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 4.3e-141 505.0 328 72.3
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 7.3e-141 504.2 328 71.3
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.3e-140 503.4 328 71.0
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 2.1e-140 502.7 328 71.6
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.8e-140 502.3 328 70.4
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.8e-140 502.3 326 72.1
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 3.6e-140 501.9 326 71.2
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.1e-139 500.4 329 71.1
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 1.4e-139 500.0 327 72.5
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.8e-139 499.6 328 72.6
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.4e-139 499.2 326 71.5
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 3.1e-139 498.8 328 72.6
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 4.0e-139 498.4 327 70.3
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 4.0e-139 498.4 328 72.3
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 9.0e-139 497.3 328 71.0
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 9.0e-139 497.3 329 71.7
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 2.0e-138 496.1 327 70.0
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.6e-138 495.7 327 71.3
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 5.8e-138 494.6 328 71.0
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 5.8e-138 494.6 327 73.1
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.6e-138 494.2 329 71.4
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 7.6e-138 494.2 328 72.3
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 9.9e-138 493.8 327 71.6
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.7e-137 493.0 317 74.1
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 1.7e-137 493.0 317 74.1
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 2.9e-137 492.3 328 69.2
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 9.3e-136 487.3 328 69.2
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 9.3e-136 487.3 328 68.9
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.2e-135 486.9 328 70.1
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 7.9e-135 484.2 328 69.2
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 7.9e-135 484.2 328 69.8
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.3e-134 482.6 325 68.3
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.9e-133 479.6 330 69.1
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 3.3e-133 478.8 329 68.7
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.6e-132 476.5 330 68.5
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.1e-132 476.1 335 67.2
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 3.7e-132 475.3 330 68.2
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.1e-131 473.8 325 68.3
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 1.4e-131 473.4 330 68.2
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.4e-131 473.4 328 68.3
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 2.4e-131 472.6 330 67.9
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 4.0e-131 471.9 308 70.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 6.9e-131 471.1 341 67.4
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 6.9e-131 471.1 327 68.2
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 9.0e-131 470.7 330 67.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.2e-130 470.3 328 65.9
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.5e-130 469.9 328 68.0
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 2.6e-130 469.2 319 69.6
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 5.8e-130 468.0 326 68.1
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 1.7e-129 466.5 346 65.3
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 2.9e-129 465.7 330 67.9
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.1e-128 463.8 331 66.2
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.1e-128 463.8 322 68.9
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 1.4e-128 463.4 341 65.1
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 1.9e-128 463.0 338 65.7
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 7.9e-127 457.6 318 68.2
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 7.9e-127 457.6 328 69.5
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 7.9e-127 457.6 328 67.1
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 3.9e-126 455.3 328 66.2
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.3e-124 450.3 328 66.2
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 4.8e-124 448.4 328 65.5
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 9.0e-123 444.1 313 66.5
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 7.6e-122 441.0 328 61.6
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.3e-121 440.3 310 66.8
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.2e-121 439.5 326 65.0
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.8e-121 438.7 326 64.7
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 3.9e-118 428.7 326 62.3
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 3.9e-118 428.7 328 61.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 5.1e-118 428.3 315 65.4
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 5.1e-118 428.3 328 61.9
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.9e-117 426.4 312 65.1
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 4.8e-116 421.8 328 60.7
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.0e-110 402.5 325 60.6
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 5.1e-110 401.7 325 60.3
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 3.1e-107 392.5 253 72.3
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 5.3e-107 391.7 236 75.8
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 6.9e-107 391.3 277 64.3
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.0e-106 389.8 328 57.0
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 8.5e-105 384.4 306 60.5
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.4e-102 377.1 309 57.9
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 6.3e-100 368.2 317 57.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 8.2e-100 367.9 255 67.5
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.1e-99 367.5 254 68.1
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.4e-99 366.3 256 66.4
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 4.1e-99 365.5 306 57.8
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 7.7e-98 361.3 317 54.9
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 9.7e-93 344.4 254 65.4
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 3.2e-80 302.8 220 67.7
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.3e-78 296.6 312 47.1
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 2.3e-78 296.6 166 78.9
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 6.6e-73 278.5 198 69.2
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 8.6e-49 198.4 142 59.9
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 6.2e-47 192.2 308 37.7
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 8.1e-47 191.8 115 74.8
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 4.9e-44 182.6 289 37.0
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 6.6e-41 172.2 301 34.2
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 4.3e-40 169.5 144 62.5
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.2e-37 161.4 132 62.1
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 6.2e-31 139.0 82 73.2
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 7.6e-29 132.1 107 55.1
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.9e-25 119.8 68 72.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 5.6e-24 115.9 72 76.4
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.8e-22 110.9 106 55.7
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 1.5e-16 91.3 127 43.3
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.8e-15 86.3 69 56.5
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.0e-12 78.6 78 56.4
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 5.1e-09 66.2 40 72.5
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.1e-06 58.5 40 62.5


User provided reference genes

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