Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.9e-93 345.9 185 100.0
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.5e-74 283.1 172 82.0
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 7.1e-72 274.2 174 83.3
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 1.8e-70 269.6 172 77.3
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 3.0e-70 268.9 173 76.3
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 9.6e-69 263.8 172 79.7
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 9.6e-69 263.8 172 79.7
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.8e-68 262.3 172 79.1
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 1.4e-67 260.0 172 79.1
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 1.2e-66 256.9 173 74.0
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 3.4e-66 255.4 173 77.5
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 4.5e-66 255.0 173 75.1
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 5.8e-66 254.6 173 74.6
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 2.3e-62 242.7 174 71.8
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 4.3e-61 238.4 172 76.2
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 1.3e-60 236.9 150 85.3
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 4.8e-60 235.0 173 69.4
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 4.8e-60 235.0 173 69.4
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.1e-59 233.8 177 67.2
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.1e-59 233.8 174 74.7
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 1.1e-59 233.8 176 73.3
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 1.4e-59 233.4 178 71.3
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 1.8e-59 233.0 177 68.4
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 2.4e-59 232.6 182 63.7
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.4e-59 232.6 173 68.8
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 3.1e-59 232.3 176 72.7
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 3.1e-59 232.3 174 69.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 4.0e-59 231.9 173 72.3
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 6.9e-59 231.1 177 72.9
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 9.0e-59 230.7 177 67.8
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.2e-58 230.3 174 71.8
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.2e-58 230.3 174 73.0
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 2.0e-58 229.6 173 72.8
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 2.0e-58 229.6 180 66.1
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 3.4e-58 228.8 173 68.8
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 4.5e-58 228.4 173 71.7
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 5.8e-58 228.0 172 72.7
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 1.3e-57 226.9 174 67.2
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 1.3e-57 226.9 174 72.4
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 1.3e-57 226.9 174 71.8
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.3e-57 226.9 174 73.0
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 1.7e-57 226.5 174 70.7
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 8.4e-57 224.2 175 64.0
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.9e-56 223.0 173 63.6
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 9.3e-56 220.7 181 64.1
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 9.3e-56 220.7 181 64.1
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 9.3e-56 220.7 173 71.1
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 1.2e-55 220.3 173 63.6
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.6e-55 219.9 173 65.9
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.6e-55 219.9 174 66.7
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.1e-55 219.5 173 64.2
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 2.7e-55 219.2 172 65.7
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 3.5e-55 218.8 175 64.0
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 4.6e-55 218.4 178 63.5
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 1.0e-54 217.2 166 65.1
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 1.8e-54 216.5 176 63.6
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 2.3e-54 216.1 166 65.1
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 2.3e-54 216.1 177 62.7
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 3.0e-54 215.7 187 65.2
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 6.7e-54 214.5 150 78.0
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 8.7e-54 214.2 178 66.3
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 2.1e-52 209.5 173 68.8
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 4.8e-52 208.4 174 64.9
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.4e-51 206.8 151 68.9
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 1.8e-51 206.5 173 61.3
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 2.4e-51 206.1 151 70.9
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 5.3e-51 204.9 113 85.8
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 6.9e-51 204.5 174 62.1
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 1.2e-50 203.8 172 61.0
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 1.5e-50 203.4 173 59.5
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 2.0e-50 203.0 174 61.5
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 2.0e-50 203.0 176 61.9
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 2.0e-50 203.0 176 60.8
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 2.6e-50 202.6 176 61.9
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 3.4e-50 202.2 176 61.9
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 3.4e-50 202.2 176 61.9
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.4e-50 202.2 113 85.0
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 4.5e-50 201.8 171 64.3
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 7.6e-50 201.1 165 63.0
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 7.6e-50 201.1 176 61.4
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.0e-49 200.7 174 62.6
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.3e-49 200.3 174 60.9
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 1.1e-48 197.2 174 59.8
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 1.1e-48 197.2 112 83.9
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.4e-48 196.8 176 59.7
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.9e-48 196.4 170 67.1
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.5e-48 196.1 170 61.2
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 3.0e-46 189.1 172 65.7
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 6.7e-46 188.0 175 57.1
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 6.7e-46 188.0 187 56.7
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 8.7e-46 187.6 172 62.8
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.1e-45 187.2 173 59.5
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 4.3e-45 185.3 175 58.3
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.3e-44 183.7 175 57.1
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 6.9e-43 177.9 103 83.5
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 9.1e-43 177.6 97 83.5
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 1.5e-42 176.8 110 74.5
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 3.6e-39 165.6 176 51.1
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 3.9e-38 162.2 104 71.2
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 7.7e-34 147.9 175 48.6
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 7.9e-31 137.9 110 60.0
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 8.8e-30 134.4 168 48.8
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 4.4e-29 132.1 101 59.4
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 3.1e-27 125.9 88 64.8
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 2.0e-26 123.2 102 56.9
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 4.5e-26 122.1 88 61.4
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 7.7e-26 121.3 139 51.8
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 2.2e-20 103.2 113 49.6
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.4e-19 100.5 111 56.8
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 4.5e-18 95.5 54 77.8
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 1.9e-08 63.5 39 69.2


User provided reference genes

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