Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G073450 Populus trichocarpa HOM05D000963 ORTHO05D005131 7.4e-74 280.4 138 100.0
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 4.4e-34 148.3 162 52.5
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 2.9e-30 135.6 162 47.5
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 4.9e-25 118.2 167 45.5
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.8e-23 110.9 164 43.9
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.8e-23 110.9 164 43.9
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 4.7e-20 101.7 170 40.0
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 4.0e-19 98.6 136 44.9
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 1.1e-16 90.5 161 40.4
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 1.2e-15 87.0 128 44.5
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 1.2e-15 87.0 128 44.5
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 1.2e-15 87.0 128 44.5
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 1.2e-15 87.0 128 44.5
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 7.8e-15 84.3 124 41.1
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 7.3e-13 77.8 74 60.8
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.2e-12 77.0 74 59.5
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 1.2e-12 77.0 74 59.5
arahy.Tifrunner.gnm1.ann1.LAST4K Arachis hypogaea HOM05D000963 ORTHO05D005131 6.2e-12 74.7 150 37.3
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 8.1e-12 74.3 75 61.3
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 1.4e-11 73.6 73 57.5
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.8e-11 73.2 74 56.8
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.0e-10 69.7 52 67.3
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 9.8e-10 67.4 178 33.1
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.2e-09 66.2 48 68.8
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-09 65.1 130 36.9
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 6.4e-09 64.7 58 62.1
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 6.4e-09 64.7 52 61.5
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.4e-08 63.5 47 68.1
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 1.4e-08 63.5 47 68.1
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 2.4e-08 62.8 54 55.6
Sed0026848 Sechium edule HOM05D000963 ORTHO05D005131 2.4e-08 62.8 54 57.4
arahy.Tifrunner.gnm1.ann1.A049RL Arachis hypogaea HOM05D000963 ORTHO05D005131 3.2e-08 62.4 53 56.6
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.2e-08 62.4 57 61.4
VMungo1215G3364 Vigna mungo HOM05D001592 ORTHO05D001533 3.2e-08 62.4 53 56.6
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 4.1e-08 62.0 47 66.0
Medtr3g035650 Medicago truncatula HOM05D000963 ORTHO05D005131 5.4e-08 61.6 53 56.6
SGA_v2.0_scaffold140G35502 Striga asiatica HOM05D000963 ORTHO05D005131 7.1e-08 61.2 54 55.6
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 1.2e-07 60.5 66 53.0
Sopen08g004620 Solanum pennellii HOM05D001396 ORTHO05D000493 1.2e-07 60.5 57 54.4
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 1.6e-07 60.1 47 61.7
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 1.6e-07 60.1 53 52.8
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.5e-07 58.9 46 63.0
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.6e-07 58.5 122 36.1
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 6.0e-07 58.2 48 62.5
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 7.8e-07 57.8 66 51.5
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 1.0e-06 57.4 44 61.4
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.7e-06 56.6 46 63.0
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.6e-06 54.7 47 61.7
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 8.6e-06 54.3 46 63.0


User provided reference genes

Program Settings