Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G073300 Populus trichocarpa HOM05D005364 ORTHO05D006554 1.3e-143 513.1 261 100.0
Sabra05G0142500 Salix brachista HOM05D005364 ORTHO05D006554 6.2e-98 361.3 271 73.8
Potri.005G186600 Populus trichocarpa HOM05D005364 ORTHO05D006554 2.2e-95 352.8 316 64.6
Manes.18G085705 Manihot esculenta HOM05D005364 ORTHO05D006554 3.9e-84 315.5 316 57.3
Atru.chr13.1665 Acer truncatum HOM05D005364 ORTHO05D006554 6.7e-84 314.7 316 57.9
CiPaw.15G022800 Carya illinoinensis HOM05D005364 ORTHO05D006554 1.3e-79 300.4 316 53.8
Gorai.005G083600 Gossypium raimondii HOM05D005364 ORTHO05D006554 8.5e-79 297.7 208 73.1
Gohir.D02G074200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 1.9e-78 296.6 208 72.6
Dinv25792 Davidia involucrata HOM05D005364 ORTHO05D006554 3.2e-78 295.8 316 55.7
Gohir.A02G068200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 9.4e-78 294.3 208 71.6
GSVIVG01010009001 Vitis vinifera HOM05D005364 ORTHO05D006554 9.4e-78 294.3 316 55.1
Cfa018384 Carpinus fangiana HOM05D005364 ORTHO05D006554 6.1e-77 291.6 199 73.9
Haze_17688 Corylus avellana HOM05D005364 ORTHO05D006554 1.0e-76 290.8 209 71.8
Thecc.08G141100 Theobroma cacao HOM05D005364 ORTHO05D006554 1.0e-76 290.8 316 53.2
Duzib041G0781 Durio zibethinus HOM05D005364 ORTHO05D006554 3.9e-76 288.9 208 71.2
TAR628G1468 Trochodendron aralioides HOM05D005364 ORTHO05D006554 5.1e-76 288.5 316 51.9
vmacro00886 Vaccinium macrocarpon HOM05D005364 ORTHO05D006554 6.7e-76 288.1 232 65.1
Rhsim11G0077000 Rhododendron simsii HOM05D005364 ORTHO05D006554 2.8e-74 282.7 209 68.9
Hma1.2p1_0107F.1_g051330 Hydrangea macrophylla HOM05D005364 ORTHO05D006554 2.4e-73 279.6 316 51.6
Prupe.8G016300 Prunus persica HOM05D005364 ORTHO05D006554 3.1e-73 279.3 316 51.6
Nn5g28547 Nelumbo nucifera HOM05D005364 ORTHO05D006554 9.1e-73 277.7 316 50.3
CSS0030633 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 2.0e-72 276.6 316 50.3
Actinidia03441 Actinidia chinensis HOM05D005364 ORTHO05D006554 4.5e-72 275.4 316 50.6
TWI34G0076 Tripterygium wilfordii HOM05D005364 ORTHO05D006554 1.0e-71 274.2 316 52.2
CSS0018960 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 2.2e-71 273.1 316 52.5
CSS0048679 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 2.2e-71 273.1 316 52.5
CANSAT25G0570 Cannabis sativa HOM05D005364 ORTHO05D006554 1.9e-70 270.0 316 50.0
Cc10_g13140 Coffea canephora HOM05D005364 ORTHO05D006554 2.5e-70 269.6 316 50.6
AUR62013475 Chenopodium quinoa HOM05D005364 ORTHO05D006554 5.5e-70 268.5 294 50.0
QL09p029051 Quercus lobata HOM05D005364 ORTHO05D006554 5.5e-70 268.5 258 57.0
Ciclev10000720m.g Citrus clementina HOM05D005364 ORTHO05D006554 7.2e-70 268.1 316 50.9
MBI03_g35292_MAGBIO Magnolia biondii HOM05D005364 ORTHO05D006554 9.4e-70 267.7 315 47.9
Lalb_Chr25g0281671 Lupinus albus HOM05D005364 ORTHO05D006554 7.9e-69 264.6 316 49.1
MD10G1011100 Malus domestica HOM05D005364 ORTHO05D006554 1.4e-68 263.8 316 49.7
MD05G1011300 Malus domestica HOM05D005364 ORTHO05D006554 8.8e-68 261.2 316 48.7
PGR142G4297 Punica granatum HOM05D005364 ORTHO05D006554 8.8e-68 261.2 199 67.3
MELO3C010582.2 Cucumis melo HOM05D005364 ORTHO05D006554 1.5e-67 260.4 208 62.5
Eucgr.F02755 Eucalyptus grandis HOM05D005364 ORTHO05D006554 1.5e-67 260.4 315 47.9
Aqoxy6G00357 Aquilegia oxysepala HOM05D005364 ORTHO05D006554 2.0e-67 260.0 210 62.9
MSTRG.1383 Avicennia marina HOM05D005364 ORTHO05D006554 2.6e-67 259.6 316 49.1
DCAR_001120 Daucus carota HOM05D005364 ORTHO05D006554 3.3e-67 259.2 208 61.1
arahy.Tifrunner.gnm1.ann1.M37XHZ Arachis hypogaea HOM05D005364 ORTHO05D006554 5.7e-67 258.5 239 59.0
Glyma.13G037300 Glycine max HOM05D005364 ORTHO05D006554 5.7e-67 258.5 316 47.8
AUR62026797 Chenopodium quinoa HOM05D005364 ORTHO05D006554 7.4e-67 258.1 199 63.3
Lalb_Chr06g0173651 Lupinus albus HOM05D005364 ORTHO05D006554 7.4e-67 258.1 316 48.1
Lj1g0018455 Lotus japonicus HOM05D005364 ORTHO05D006554 1.3e-66 257.3 316 48.4
Sed0004836 Sechium edule HOM05D005364 ORTHO05D006554 1.3e-66 257.3 208 61.5
EL10Ac1g01440 Beta vulgaris HOM05D005364 ORTHO05D006554 2.2e-66 256.5 202 61.9
ClCG08G002730 Citrullus lanatus HOM05D005364 ORTHO05D006554 6.3e-66 255.0 298 48.0
Glyma.14G119200 Glycine max HOM05D005364 ORTHO05D006554 6.3e-66 255.0 316 47.8
Cpa.g.sc26.95 Carica papaya HOM05D005364 ORTHO05D006554 1.1e-65 254.2 207 65.2
Sc15g0007420 Simmondsia chinensis HOM05D005364 ORTHO05D006554 1.8e-65 253.4 315 47.0
CsaV3_6G035590 Cucumis sativus L. HOM05D005364 ORTHO05D006554 2.4e-65 253.1 208 60.6
Oeu001555.1 Olea europaea HOM05D005364 ORTHO05D006554 3.1e-65 252.7 208 63.5
Sc15g0007440 Simmondsia chinensis HOM05D001552 ORTHO05D003294 3.1e-65 252.7 315 47.0
SalBow7G3071 Salvia bowleyana HOM05D005364 ORTHO05D006554 7.0e-65 251.5 208 63.5
Phvul.001G064400 Phaseolus vulgaris HOM05D005364 ORTHO05D006554 9.1e-65 251.1 316 47.8
FAN15G1836 Fragaria x ananassa HOM05D005364 ORTHO05D006554 1.2e-64 250.8 316 47.8
THA.LOC104798861 Tarenaya hassleriana HOM05D005364 ORTHO05D006554 1.2e-64 250.8 207 62.3
TPR.G33301 Trifolium pratense HOM05D005364 ORTHO05D006554 1.6e-64 250.4 208 61.1
Migut.C01101 Erythranthe guttata HOM05D005364 ORTHO05D006554 3.5e-64 249.2 209 63.6
FAN24G1520 Fragaria x ananassa HOM05D005364 ORTHO05D006554 4.5e-64 248.8 315 47.6
Psat6g039520 Pisum sativum HOM05D005364 ORTHO05D006554 4.5e-64 248.8 199 61.3
RcHm_v2.0_Chr6g0277571 Rosa chinensis HOM05D005364 ORTHO05D006554 4.5e-64 248.8 316 47.5
HanXRQChr15g0484621 Helianthus annuus HOM05D005364 ORTHO05D006554 5.9e-64 248.4 208 60.6
SGA_v2.0_scaffold24G10388 Striga asiatica HOM05D005364 ORTHO05D006554 5.9e-64 248.4 208 63.5
Thhalv10003904m.g Eutrema salsugineum HOM05D005364 ORTHO05D006554 1.7e-63 246.9 315 45.4
DCAR_010238 Daucus carota HOM05D005364 ORTHO05D006554 2.2e-63 246.5 208 60.6
Peaxi162Scf00066g01936 Petunia axillaris HOM05D005364 ORTHO05D006554 3.8e-63 245.7 210 62.9
Lj4C689G10 Lonicera japonica HOM05D005364 ORTHO05D006554 1.5e-62 243.8 300 50.7
FAN27G1309 Fragaria x ananassa HOM05D005364 ORTHO05D006554 1.9e-62 243.4 316 46.5
Sp2g21830 Schrenkiella parvula HOM05D005364 ORTHO05D006554 2.1e-61 240.0 207 58.5
arahy.Tifrunner.gnm1.ann1.3V9M2M Arachis hypogaea HOM05D005364 ORTHO05D006554 2.7e-61 239.6 288 50.0
PSO675G4293 Papaver somniferum HOM05D005364 ORTHO05D006554 3.6e-61 239.2 208 58.2
Aa31LG11G4810 Aethionema arabicum HOM05D005364 ORTHO05D006554 6.1e-61 238.4 207 58.0
AT5G25800 Arabidopsis thaliana HOM05D005364 ORTHO05D006554 1.0e-60 237.7 315 45.4
CAN.G657.4 Capsicum annuum HOM05D005364 ORTHO05D006554 1.8e-60 236.9 210 59.0
COL.COLO4_33812 Corchorus olitorius HOM05D005364 ORTHO05D006554 3.0e-60 236.1 169 71.0
Lsat_1_v5_gn_9_124401 Lactuca sativa HOM05D005364 ORTHO05D006554 3.0e-60 236.1 209 57.9
FvH4_2g15020 Fragaria vesca HOM05D005364 ORTHO05D006554 4.0e-60 235.7 309 46.9
CDE08G0765 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 5.2e-60 235.3 317 44.8
PSO541G2378 Papaver somniferum HOM05D005364 ORTHO05D006554 5.2e-60 235.3 208 58.2
ECA232G1379 Erigeron canadensis HOM05D005364 ORTHO05D006554 2.0e-59 233.4 208 56.7
CARHR187620 Cardamine hirsuta HOM05D005364 ORTHO05D006554 4.4e-59 232.3 207 60.4
CDE02G4564 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 7.5e-59 231.5 209 56.5
AL6G37660 Arabidopsis lyrata HOM05D005364 ORTHO05D006554 9.7e-59 231.1 315 43.8
Medtr1g029410 Medicago truncatula HOM05D005364 ORTHO05D006554 1.3e-58 230.7 316 44.6
BcaNung04840 Brassica carinata HOM05D005364 ORTHO05D006554 1.7e-58 230.3 316 43.0
Sopen04g026510 Solanum pennellii HOM05D005364 ORTHO05D006554 3.7e-58 229.2 210 58.6
Ah.05g169340 Amaranthus hybridus HOM05D005364 ORTHO05D006554 2.4e-57 226.5 315 43.5
BcaC03g17892 Brassica carinata HOM05D005364 ORTHO05D006554 2.4e-57 226.5 208 56.2
Nitab4.5_0007147g0010 Nicotiana tabacum HOM05D005364 ORTHO05D006554 3.1e-57 226.1 308 46.4
A02p39590 Brassica napus HOM05D005364 ORTHO05D006554 4.1e-57 225.7 208 56.7
C02p59350 Brassica napus HOM05D005364 ORTHO05D006554 7.0e-57 224.9 208 55.8
Carub.0006s2357 Capsella rubella HOM05D005364 ORTHO05D006554 7.0e-57 224.9 315 43.5
BcaB07g29980 Brassica carinata HOM05D005364 ORTHO05D006554 1.6e-56 223.8 316 42.7
BcaNung03925 Brassica carinata HOM05D005364 ORTHO05D006554 1.6e-56 223.8 316 42.7
Solyc04g064560.4 Solanum lycopersicum HOM05D005364 ORTHO05D006554 2.7e-56 223.0 205 58.5
BolC2t11997H Brassica oleracea HOM05D005364 ORTHO05D006554 3.5e-56 222.6 208 55.8
C07p42120 Brassica napus HOM05D005364 ORTHO05D006554 4.5e-56 222.2 208 55.8
BraA02t08927Z Brassica rapa HOM05D005364 ORTHO05D006554 4.5e-56 222.2 313 43.1
BolC7t44743H Brassica oleracea HOM05D005364 ORTHO05D006554 5.9e-56 221.9 316 42.1
Nitab4.5_0000174g0280 Nicotiana tabacum HOM05D005364 ORTHO05D006554 7.7e-56 221.5 200 60.0
BraA06t26562Z Brassica rapa HOM05D005364 ORTHO05D006554 1.7e-55 220.3 208 55.8
ATR0138G016 Amborella trichopoda HOM05D005364 ORTHO05D006554 5.0e-55 218.8 208 51.9
A06p36390 Brassica napus HOM05D005364 ORTHO05D006554 1.5e-54 217.2 208 55.8
Dinv41139 Davidia involucrata HOM05D005364 ORTHO05D006554 2.5e-54 216.5 163 69.9
VMungo0647G0736 Vigna mungo HOM05D005364 ORTHO05D006554 1.1e-49 201.1 168 61.3
Ca_12657_v3 Cicer arietinum L. HOM05D005364 ORTHO05D003291 4.5e-48 195.7 159 59.1
HPP92_019392 Vanilla planifolia HOM05D005364 ORTHO05D006554 1.6e-45 187.2 199 48.7
Zm00001eb409200 Zea mays HOM05D005364 ORTHO05D006554 1.8e-44 183.7 207 48.3
Hund26737 Selenicereus undatus HOM05D008449 ORTHO05D010615 5.0e-39 165.6 205 45.9
Zm00001eb138630 Zea mays HOM05D005364 ORTHO05D006554 3.6e-37 159.5 163 52.8
SEGI_18953 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 1.8e-28 130.6 160 43.8
Mapoly0062s0092 Marchantia polymorpha HOM05D005364 ORTHO05D006554 1.5e-22 110.9 192 35.4
Pp3c7_16700 Physcomitrium patens HOM05D005364 ORTHO05D006554 1.2e-21 107.8 201 35.3
Pp3c1_5030 Physcomitrium patens HOM05D005364 ORTHO05D006554 4.0e-20 102.8 223 32.7
CBR_g39514 Chara braunii HOM05D005364 ORTHO05D006554 7.8e-16 88.6 214 25.7
GSVIVG01030984001 Vitis vinifera HOM05D005364 ORTHO05D006554 1.1e-09 68.2 63 54.0
GSVIVG01030987001 Vitis vinifera HOM05D005364 ORTHO05D006554 1.1e-09 68.2 63 54.0
Os12g0188900 Oryza sativa ssp. japonica HOM05D005364 ORTHO05D006554 1.4e-09 67.8 79 45.6
HPP92_021466 Vanilla planifolia HOM05D005364 ORTHO05D006554 2.4e-09 67.0 297 27.9
Pp3c7_4920 Physcomitrium patens HOM05D005364 ORTHO05D006554 3.2e-09 66.6 201 30.8


User provided reference genes

Program Settings