Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G069151 Populus trichocarpa HOM05D000257 ORTHO05D008537 6.1e-24 113.2 54 100.0
CiPaw.16G013600 Carya illinoinensis HOM05D000257 ORTHO05D008537 4.0e-15 84.0 53 69.8
QL02p073939 Quercus lobata HOM05D000257 ORTHO05D008537 5.2e-15 83.6 53 71.7
Cfa018331 Carpinus fangiana HOM05D000257 ORTHO05D008537 8.9e-15 82.8 53 69.8
SHI09387 Sapria himalayana HOM05D000257 ORTHO05D008537 8.9e-15 82.8 53 69.8
Dinv26364 Davidia involucrata HOM05D000257 ORTHO05D008537 2.0e-14 81.6 53 69.8
Potri.005G191100 Populus trichocarpa HOM05D000257 ORTHO05D008537 2.6e-14 81.3 53 71.7
Nn5g28718 Nelumbo nucifera HOM05D000257 ORTHO05D008537 3.4e-14 80.9 53 71.7
Sabra05G0146000 Salix brachista HOM05D000257 ORTHO05D008537 3.4e-14 80.9 53 71.7
Aqoxy7G01167 Aquilegia oxysepala HOM05D000257 ORTHO05D008537 4.4e-14 80.5 53 67.9
Ciclev10001289m.g Citrus clementina HOM05D000257 ORTHO05D008537 4.4e-14 80.5 53 69.8
RcHm_v2.0_Chr6g0275671 Rosa chinensis HOM05D000257 ORTHO05D008537 4.4e-14 80.5 53 67.9
MSTRG.560 Avicennia marina HOM05D000257 ORTHO05D008537 5.7e-14 80.1 53 66.0
FAN20G0765 Fragaria x ananassa HOM05D000257 ORTHO05D008537 5.7e-14 80.1 53 67.9
Prupe.8G028100 Prunus persica HOM05D000257 ORTHO05D008537 5.7e-14 80.1 53 67.9
AL4G26520 Arabidopsis lyrata HOM05D000257 ORTHO05D008537 7.5e-14 79.7 53 69.8
Carub.0004s1258 Capsella rubella HOM05D000257 ORTHO05D008537 7.5e-14 79.7 53 69.8
CARHR223930 Cardamine hirsuta HOM05D000257 ORTHO05D008537 7.5e-14 79.7 53 69.8
FvH4_2g13920 Fragaria vesca HOM05D000257 ORTHO05D008537 7.5e-14 79.7 53 67.9
FAN24G0329 Fragaria x ananassa HOM05D000257 ORTHO05D008537 7.5e-14 79.7 53 67.9
Sp7g16930 Schrenkiella parvula HOM05D000257 ORTHO05D008537 7.5e-14 79.7 53 71.7
Haze_17745 Corylus avellana HOM05D000257 ORTHO05D008537 9.8e-14 79.3 53 67.9
Manes.13G038100 Manihot esculenta HOM05D000257 ORTHO05D008537 9.8e-14 79.3 53 69.8
THA.LOC104816759 Tarenaya hassleriana HOM05D000257 ORTHO05D008537 9.8e-14 79.3 53 66.0
GSVIVG01034511001 Vitis vinifera HOM05D000257 ORTHO05D008537 9.8e-14 79.3 53 67.9
Lj7P371T36 Lonicera japonica HOM05D000257 ORTHO05D008537 1.3e-13 79.0 53 64.2
AUR62026720 Chenopodium quinoa HOM05D000257 ORTHO05D008537 1.7e-13 78.6 53 64.2
Thhalv10027159m.g Eutrema salsugineum HOM05D000257 ORTHO05D008537 1.7e-13 78.6 53 69.8
MD05G1023500 Malus domestica HOM05D000257 ORTHO05D008537 1.7e-13 78.6 53 66.0
Actinidia17800 Actinidia chinensis HOM05D000257 ORTHO05D008537 2.2e-13 78.2 53 66.0
FAN27G3100 Fragaria x ananassa HOM05D000257 ORTHO05D008537 2.2e-13 78.2 53 66.0
PGR042G3587 Punica granatum HOM05D000257 ORTHO05D008537 2.2e-13 78.2 53 67.9
vmacro21699 Vaccinium macrocarpon HOM05D000257 ORTHO05D008537 2.2e-13 78.2 53 67.9
Cpa.g.sc21.189 Carica papaya HOM05D000257 ORTHO05D008537 2.8e-13 77.8 53 67.9
AUR62013569 Chenopodium quinoa HOM05D000257 ORTHO05D008537 2.8e-13 77.8 53 62.3
FAN15G3320 Fragaria x ananassa HOM05D000257 ORTHO05D008537 2.8e-13 77.8 53 66.0
Rhsim06G0026600 Rhododendron simsii HOM05D000257 ORTHO05D008537 2.8e-13 77.8 53 66.0
Ah.05g167850 Amaranthus hybridus HOM05D000257 ORTHO05D008537 3.7e-13 77.4 53 64.2
AT2G31290 Arabidopsis thaliana HOM05D000257 ORTHO05D008537 3.7e-13 77.4 53 66.0
EL10Ac3g05262 Beta vulgaris HOM05D000257 ORTHO05D008537 3.7e-13 77.4 53 60.4
Migut.H02335 Erythranthe guttata HOM05D000257 ORTHO05D008537 3.7e-13 77.4 53 64.2
TAR381G1141 Trochodendron aralioides HOM05D000257 ORTHO05D008537 3.7e-13 77.4 53 67.9
Hma1.2p1_0105F.1_g050820 Hydrangea macrophylla HOM05D000257 ORTHO05D008537 4.9e-13 77.0 53 66.0
Peaxi162Scf00765g00018 Petunia axillaris HOM05D000257 ORTHO05D008537 4.9e-13 77.0 53 64.2
Atru.chr13.2156 Acer truncatum HOM05D000257 ORTHO05D008537 6.3e-13 76.6 53 66.0
PSO541G3733 Papaver somniferum HOM05D000257 ORTHO05D008537 6.3e-13 76.6 53 64.2
SalBow7G3302 Salvia bowleyana HOM05D000257 ORTHO05D008537 6.3e-13 76.6 53 64.2
unitig_0.g988 Utricularia gibba HOM05D000257 ORTHO05D008537 6.3e-13 76.6 53 60.4
Actinidia10654 Actinidia chinensis HOM05D000257 ORTHO05D008537 1.1e-12 75.9 53 62.3
SGA_v2.0_scaffold6G03201 Striga asiatica HOM05D000257 ORTHO05D008537 1.1e-12 75.9 53 62.3
Aa31LG11G14010 Aethionema arabicum HOM05D000257 ORTHO05D008537 1.4e-12 75.5 53 64.2
BcaC09g50458 Brassica carinata HOM05D000257 ORTHO05D008537 1.4e-12 75.5 53 66.0
C01p25260 Brassica napus HOM05D000257 ORTHO05D008537 1.4e-12 75.5 53 66.0
BolC1t02476H Brassica oleracea HOM05D000257 ORTHO05D008537 1.4e-12 75.5 53 66.0
Cc10_g14720 Coffea canephora HOM05D000257 ORTHO05D008537 1.4e-12 75.5 53 62.3
Thecc.08G149700 Theobroma cacao HOM05D000257 ORTHO05D008537 2.4e-12 74.7 53 67.9
Nitab4.5_0000032g0050 Nicotiana tabacum HOM05D000257 ORTHO05D008537 3.2e-12 74.3 53 60.4
Nitab4.5_0004790g0030 Nicotiana tabacum HOM05D000257 ORTHO05D008537 3.2e-12 74.3 53 60.4
Sed0024568 Sechium edule HOM05D000257 ORTHO05D008537 3.2e-12 74.3 53 60.4
CSS0036500 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D008537 4.1e-12 73.9 53 60.4
COL.COLO4_37838 Corchorus olitorius HOM05D000257 ORTHO05D008537 4.1e-12 73.9 53 66.0
Solyc04g071290.4 Solanum lycopersicum HOM05D000257 ORTHO05D008537 4.1e-12 73.9 53 60.4
Sopen04g027240 Solanum pennellii HOM05D000257 ORTHO05D008537 4.1e-12 73.9 53 60.4
PGSC0003DMG400008616 Solanum tuberosum HOM05D000257 ORTHO05D008537 4.1e-12 73.9 53 60.4
Duzib041G0286 Durio zibethinus HOM05D000257 ORTHO05D008537 5.4e-12 73.6 53 64.2
Ca_27731_v3 Cicer arietinum L. HOM05D000257 ORTHO05D008537 7.0e-12 73.2 53 58.5
Lj5g0018709 Lotus japonicus HOM05D000257 ORTHO05D008537 7.0e-12 73.2 53 60.4
Lalb_Chr06g0161541 Lupinus albus HOM05D000257 ORTHO05D008537 7.0e-12 73.2 53 62.3
CDE04G0494 Ceratophyllum demersum HOM05D005388 ORTHO05D006281 9.2e-12 72.8 53 60.4
BcaNung00107 Brassica carinata HOM05D000257 ORTHO05D008537 1.2e-11 72.4 53 64.2
A01p20110 Brassica napus HOM05D000257 ORTHO05D008537 1.2e-11 72.4 53 64.2
BraA01t01935Z Brassica rapa HOM05D000257 ORTHO05D008537 1.2e-11 72.4 53 64.2
CAN.G905.15 Capsicum annuum HOM05D000257 ORTHO05D008537 1.6e-11 72.0 53 58.5
Oeu031093.1 Olea europaea HOM05D000257 ORTHO05D008537 1.6e-11 72.0 53 64.2
Psat6g193080 Pisum sativum HOM05D000257 ORTHO05D008537 2.7e-11 71.2 53 56.6
Lsat_1_v5_gn_5_89920 Lactuca sativa HOM05D000257 ORTHO05D008537 3.5e-11 70.9 53 60.4
Gohir.D02G070350 Gossypium hirsutum HOM05D000257 ORTHO05D008537 4.5e-11 70.5 53 62.3
Gorai.005G079400 Gossypium raimondii HOM05D000257 ORTHO05D008537 4.5e-11 70.5 53 62.3
Eucgr.B00887 Eucalyptus grandis HOM05D000257 ORTHO05D008537 5.9e-11 70.1 53 56.6
Eucgr.B00984 Eucalyptus grandis HOM05D000257 ORTHO05D008537 5.9e-11 70.1 53 56.6
Glyma.10G225700 Glycine max HOM05D000257 ORTHO05D008537 7.8e-11 69.7 53 54.7
HanXRQChr05g0161571 Helianthus annuus HOM05D000257 ORTHO05D008537 1.0e-10 69.3 53 56.6
CsaV3_1G019690 Cucumis sativus L. HOM05D000257 ORTHO05D008537 1.3e-10 68.9 53 52.8
CsaV3_6G005280 Cucumis sativus L. HOM05D000257 ORTHO05D008537 1.3e-10 68.9 53 52.8
Gohir.A02G064400 Gossypium hirsutum HOM05D000257 ORTHO05D008537 1.3e-10 68.9 53 60.4
MBI19_g25017_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D008537 1.7e-10 68.6 50 62.0
ClCG08G006950 Citrullus lanatus HOM05D000257 ORTHO05D008537 2.3e-10 68.2 53 54.7
Phvul.007G079300 Phaseolus vulgaris HOM05D000257 ORTHO05D008537 2.3e-10 68.2 53 54.7
VMungo0720G2143 Vigna mungo HOM05D000257 ORTHO05D008537 2.3e-10 68.2 53 54.7
MELO3C008345.2 Cucumis melo HOM05D000257 ORTHO05D008537 2.9e-10 67.8 53 50.9
Psat6g193240 Pisum sativum HOM05D000257 ORTHO05D008537 2.9e-10 67.8 53 54.7
DCAR_016345 Daucus carota HOM05D000257 ORTHO05D008537 3.9e-10 67.4 53 54.7
ECA246G2106 Erigeron canadensis HOM05D000257 ORTHO05D008537 3.9e-10 67.4 53 54.7
Oeu023266.1 Olea europaea HOM05D000257 ORTHO05D008537 5.0e-10 67.0 53 56.6
arahy.Tifrunner.gnm1.ann1.2YI87A Arachis hypogaea HOM05D000257 ORTHO05D008537 1.1e-09 65.9 53 54.7
arahy.Tifrunner.gnm1.ann1.49R5B9 Arachis hypogaea HOM05D000257 ORTHO05D008537 1.1e-09 65.9 53 54.7
CAN.G231.29 Capsicum annuum HOM05D000257 ORTHO05D008537 1.5e-09 65.5 53 52.8
Sc20g0003500 Simmondsia chinensis HOM05D000257 ORTHO05D008537 1.9e-09 65.1 53 52.8
Medtr1g098960 Medicago truncatula HOM05D000257 ORTHO05D008537 5.6e-09 63.5 53 52.8
Medtr3g448960 Medicago truncatula HOM05D000257 ORTHO05D008537 5.6e-09 63.5 53 52.8
Medtr1g019170 Medicago truncatula HOM05D000257 ORTHO05D008537 9.5e-09 62.8 53 52.8
Medtr3g029990 Medicago truncatula HOM05D000257 ORTHO05D008537 9.5e-09 62.8 53 52.8
ATR0772G102 Amborella trichopoda HOM05D000257 ORTHO05D008537 1.6e-08 62.0 53 45.3
Medtr7g009010 Medicago truncatula HOM05D000257 ORTHO05D008537 6.1e-08 60.1 53 49.1
Medtr2g017885 Medicago truncatula HOM05D000257 ORTHO05D008537 1.8e-07 58.5 53 47.2
Medtr3g030020 Medicago truncatula HOM05D000257 ORTHO05D008537 1.8e-07 58.5 53 50.9


User provided reference genes

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