Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 6.4e-202 707.2 358 100.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 6.0e-168 594.3 355 80.6
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.1e-161 573.5 355 75.8
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.8e-159 566.2 355 75.8
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 2.3e-159 565.8 356 78.4
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 3.0e-159 565.5 353 78.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.6e-157 559.7 353 78.2
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.6e-157 559.7 356 73.9
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 8.1e-157 557.4 353 77.9
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.8e-156 556.2 356 75.6
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.8e-156 556.2 357 77.0
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.0e-156 555.1 355 75.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 5.3e-156 554.7 353 77.6
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 9.0e-156 553.9 360 73.3
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.7e-154 549.7 359 72.4
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.4e-154 547.7 351 75.8
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 3.2e-153 545.4 355 72.4
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.1e-152 542.7 352 72.7
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 3.5e-152 542.0 352 75.6
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 7.9e-152 540.8 352 75.6
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 5.1e-151 538.1 356 73.0
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 8.7e-151 537.3 330 77.3
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.9e-150 536.2 353 71.4
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.8e-149 531.6 351 70.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 7.6e-147 524.2 351 70.7
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 2.2e-146 522.7 355 69.6
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 3.8e-146 521.9 351 70.1
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 4.9e-146 521.5 351 68.4
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 5.5e-145 518.1 356 68.8
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 7.1e-145 517.7 351 68.9
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 2.7e-144 515.8 353 70.8
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.6e-144 515.0 351 67.2
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 6.0e-144 514.6 350 67.1
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.3e-143 513.5 351 66.7
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 2.3e-143 512.7 352 72.4
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.3e-143 512.7 351 71.8
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 5.1e-143 511.5 351 65.8
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.5e-142 510.0 351 68.7
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.3e-142 508.8 384 64.3
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 3.3e-142 508.8 454 57.9
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.6e-141 506.5 351 66.7
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 4.8e-141 505.0 358 66.2
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 8.2e-141 504.2 351 66.7
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 3.1e-140 502.3 350 64.3
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 5.3e-140 501.5 351 67.2
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.0e-138 497.3 415 60.0
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.7e-138 496.5 415 60.0
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 3.8e-138 495.4 355 71.3
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 8.5e-138 494.2 351 65.8
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 6.1e-136 488.0 352 70.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.1e-136 488.0 352 70.2
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.8e-135 486.5 352 66.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.3e-135 486.1 352 69.9
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 6.7e-135 484.6 364 62.9
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 8.7e-135 484.2 352 63.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 4.1e-132 475.3 319 68.7
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.4e-129 466.8 352 61.9
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 3.6e-128 462.2 352 61.6
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.8e-127 459.9 502 50.2
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.8e-127 459.9 360 61.7
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 4.8e-125 451.8 352 61.4
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.5e-113 413.7 456 49.6
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.9e-113 413.3 354 58.5
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.2e-107 394.0 286 65.4
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 9.4e-105 384.4 235 78.7
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.3e-89 332.8 191 77.5
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.7e-85 320.5 291 55.0
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 2.2e-85 320.1 357 45.1
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.8e-78 295.4 367 41.4
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.7e-77 293.9 208 63.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 9.2e-76 288.1 343 46.9
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 2.0e-70 270.4 218 59.6
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 3.0e-66 256.5 160 71.2
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 2.4e-63 246.9 149 71.1
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 7.1e-60 235.3 233 48.5
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 3.6e-56 223.0 141 71.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.4e-55 220.3 162 77.8
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 2.4e-55 220.3 249 49.4
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.8e-48 196.1 366 32.8
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 7.1e-44 182.2 116 71.6
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 4.3e-41 172.9 422 28.7
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 6.7e-34 149.1 376 28.7
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.5e-33 147.9 110 65.5
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.5e-30 136.3 102 67.6
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 4.5e-30 136.3 103 65.0
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.9e-28 131.0 74 74.3
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 1.9e-28 131.0 74 74.3
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.5e-28 129.4 113 61.1
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-27 128.3 75 77.3
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.9e-26 123.2 105 51.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 4.8e-24 116.3 69 72.5
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.9e-23 112.5 68 76.5
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.0e-23 112.1 68 75.0
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.6e-22 110.5 68 75.0
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.7e-22 109.0 68 75.0
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 7.7e-22 109.0 109 49.5
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.2e-19 101.7 74 66.2
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 4.6e-19 99.8 55 78.2
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 6.1e-19 99.4 189 31.7
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-16 91.7 64 67.2
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-14 85.1 54 68.5
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.7e-11 73.9 49 63.3
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.8e-10 71.2 94 40.4
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 4.4e-09 66.6 57 52.6
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.3e-08 65.1 160 29.4
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 8.2e-08 62.4 93 39.8
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 7.0e-07 59.3 90 46.7


User provided reference genes

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