Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.5e-95 352.8 182 100.0
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 8.5e-86 320.5 182 91.8
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.5e-69 266.5 182 78.6
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 5.2e-67 258.1 179 76.0
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 2.8e-52 209.1 182 67.0
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 2.6e-50 202.6 182 63.7
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.3e-46 190.3 182 62.1
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.9e-45 186.4 182 61.0
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 5.6e-45 184.9 182 59.9
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 5.6e-45 184.9 182 59.9
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.2e-44 183.7 182 58.8
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 6.2e-44 181.4 177 63.8
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 2.3e-43 179.5 182 59.9
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 5.2e-43 178.3 183 59.6
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 2.0e-42 176.4 187 59.9
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 4.4e-42 175.3 182 56.0
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 9.8e-42 174.1 166 61.4
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.6e-39 166.8 182 56.0
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 6.0e-39 164.9 168 57.1
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 5.1e-38 161.8 159 62.3
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 3.3e-37 159.1 181 56.4
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 7.3e-37 157.9 155 60.0
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 9.5e-37 157.5 187 54.5
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.1e-36 156.4 183 54.1
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 2.8e-36 156.0 182 55.5
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.7e-36 155.2 182 53.3
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 8.1e-36 154.5 180 55.0
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 8.1e-36 154.5 187 54.0
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.3e-35 152.9 182 53.3
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.0e-35 152.1 181 51.9
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 6.8e-35 151.4 184 54.9
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 2.6e-34 149.4 181 54.1
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 3.4e-34 149.1 186 51.6
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 4.4e-34 148.7 184 53.3
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 1.3e-33 147.1 184 52.2
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 4.9e-33 145.2 181 52.5
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.9e-32 143.3 182 51.1
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 3.2e-32 142.5 170 55.9
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 4.1e-32 142.1 182 50.0
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 4.1e-32 142.1 182 50.0
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 5.4e-32 141.7 170 54.7
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.6e-31 140.2 172 52.9
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 1.6e-31 140.2 182 48.4
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.6e-31 140.2 182 49.5
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 2.1e-31 139.8 172 52.9
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.7e-31 139.4 182 50.5
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.6e-31 138.7 182 48.4
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 6.0e-31 138.3 106 74.5
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 7.8e-31 137.9 185 50.8
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.3e-30 137.1 182 48.9
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.0e-30 136.0 107 69.2
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.9e-30 135.6 136 61.8
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 6.6e-30 134.8 184 50.5
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 6.6e-30 134.8 143 55.9
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 8.6e-30 134.4 113 67.3
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 8.6e-30 134.4 114 65.8
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 1.1e-29 134.0 132 61.4
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.5e-29 133.7 184 50.5
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.5e-29 132.9 181 48.1
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.5e-29 132.9 181 48.1
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 2.5e-29 132.9 172 50.6
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 2.5e-29 132.9 163 54.6
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 3.3e-29 132.5 158 51.9
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 4.3e-29 132.1 182 48.4
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 5.6e-29 131.7 184 50.0
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 9.6e-29 131.0 114 64.0
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 9.6e-29 131.0 184 49.5
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 9.6e-29 131.0 184 48.9
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.2e-28 130.6 86 80.2
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.2e-28 130.6 86 80.2
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.2e-28 130.6 86 80.2
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.2e-28 130.6 86 80.2
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.2e-28 130.6 86 80.2
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 2.1e-28 129.8 183 48.6
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 2.1e-28 129.8 184 48.9
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 2.8e-28 129.4 113 65.5
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 3.6e-28 129.0 137 57.7
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 3.6e-28 129.0 182 47.8
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 4.7e-28 128.6 87 79.3
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 4.7e-28 128.6 182 46.7
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 4.7e-28 128.6 171 47.4
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 6.2e-28 128.3 182 48.4
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 6.2e-28 128.3 87 78.2
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 6.2e-28 128.3 87 78.2
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 8.1e-28 127.9 86 80.2
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.1e-27 127.5 103 69.9
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.1e-27 127.5 182 50.0
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.4e-27 127.1 117 63.2
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.8e-27 126.7 184 47.8
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 5.2e-27 125.2 119 63.0
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 6.9e-27 124.8 86 75.6
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.9e-27 124.8 86 75.6
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.9e-27 124.8 86 75.6
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.9e-27 124.8 86 75.6
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 8.9e-27 124.4 137 54.7
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.2e-26 124.0 86 75.6
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 2.0e-26 123.2 182 45.1
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 7.6e-26 121.3 139 54.7
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.7e-25 120.2 86 69.8
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 2.9e-25 119.4 86 72.1
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.9e-24 116.7 188 44.1
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 5.4e-24 115.2 144 51.4
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 5.4e-24 115.2 85 69.4
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 1.2e-23 114.0 90 65.6
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 5.1e-22 108.6 184 46.2
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 8.7e-22 107.8 83 67.5
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 7.3e-21 104.8 83 66.3
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.6e-20 102.4 182 40.7
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 8.1e-20 101.3 83 65.1
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 5.3e-19 98.6 65 78.5
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 5.3e-19 98.6 116 51.7
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 7.9e-15 84.7 119 44.5
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 7.4e-13 78.2 87 52.9
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 9.6e-13 77.8 129 41.9
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 9.6e-13 77.8 84 50.0
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.0e-11 72.4 87 49.4
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 3.5e-07 59.3 49 61.2


User provided reference genes

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