Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 3.8e-66 254.6 122 100.0
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 3.9e-50 201.4 135 77.8
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 5.8e-46 187.6 135 73.3
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 9.5e-41 170.2 138 63.0
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 1.2e-30 136.7 133 57.1
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 1.4e-28 129.8 136 52.9
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 2.4e-28 129.0 139 51.8
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 5.4e-28 127.9 138 56.5
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 7.1e-28 127.5 136 52.2
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 2.1e-27 125.9 138 53.6
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 3.5e-27 125.2 139 51.1
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 1.5e-25 119.8 143 52.4
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 2.5e-25 119.0 138 51.4
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 5.6e-25 117.9 144 48.6
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 9.6e-25 117.1 138 50.7
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 1.8e-23 112.8 135 48.1
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 2.4e-23 112.5 141 53.9
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 2.4e-23 112.5 144 44.4
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 5.3e-23 111.3 123 54.5
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 6.9e-23 110.9 141 53.2
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 6.9e-23 110.9 126 49.2
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 1.2e-22 110.2 134 50.7
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 1.5e-22 109.8 127 50.4
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 2.6e-22 109.0 127 46.5
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 4.4e-22 108.2 122 49.2
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 4.4e-22 108.2 145 48.3
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 9.9e-22 107.1 140 47.1
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 2.2e-21 105.9 126 46.8
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 6.4e-21 104.4 137 51.1
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 8.4e-21 104.0 125 46.4
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 8.4e-21 104.0 136 49.3
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 8.4e-21 104.0 141 51.8
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.4e-20 103.2 136 49.3
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 1.4e-20 103.2 123 52.0
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 3.2e-20 102.1 135 44.4
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 4.2e-20 101.7 128 44.5
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 5.4e-20 101.3 137 48.2
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 7.1e-20 100.9 123 46.3
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 7.1e-20 100.9 127 48.8
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 2.1e-19 99.4 137 47.4
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 2.1e-19 99.4 124 49.2
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 2.7e-19 99.0 122 45.1
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 1.0e-18 97.1 138 47.1
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 5.1e-18 94.7 126 46.8
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 6.6e-18 94.4 121 44.6
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 8.7e-18 94.0 139 46.8
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.5e-17 93.2 125 44.0
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 1.5e-17 93.2 137 47.4
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.5e-17 93.2 137 47.4
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 3.3e-17 92.0 126 44.4
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 3.3e-17 92.0 125 43.2
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 3.3e-17 92.0 128 46.9
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 4.3e-17 91.7 127 44.1
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 9.6e-17 90.5 126 46.8
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 1.3e-16 90.1 98 56.1
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 1.3e-16 90.1 120 46.7
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 1.6e-16 89.7 121 43.8
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 2.1e-16 89.4 135 41.5
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 3.6e-16 88.6 125 42.4
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 6.2e-16 87.8 126 42.9
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 6.2e-16 87.8 102 52.0
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 1.8e-15 86.3 122 46.7
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 2.4e-15 85.9 134 44.8
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 5.3e-15 84.7 121 44.6
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 5.3e-15 84.7 121 44.6
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 9.0e-15 84.0 121 43.8
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 9.0e-15 84.0 102 50.0
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 1.2e-14 83.6 121 43.8
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 7.6e-14 80.9 115 44.3
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 9.9e-14 80.5 100 50.0
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 4.9e-13 78.2 101 47.5
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 1.3e-10 70.1 104 45.2


User provided reference genes

Program Settings