Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G053332 Populus trichocarpa HOM05D005096 ORTHO05D006566 1.6e-155 552.7 281 100.0
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 3.1e-87 325.9 256 70.3
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 1.1e-79 300.8 256 66.0
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 6.5e-77 291.6 257 62.6
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 2.1e-75 286.6 256 61.3
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 2.1e-75 286.6 256 60.2
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 1.0e-74 284.3 256 61.3
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 1.4e-74 283.9 256 59.8
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 4.0e-74 282.3 256 59.0
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 4.0e-74 282.3 256 59.8
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 6.8e-74 281.6 256 59.8
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 6.8e-74 281.6 256 59.4
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 8.8e-74 281.2 256 59.4
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.5e-73 280.4 256 59.4
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 2.0e-73 280.0 262 59.2
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 9.8e-73 277.7 256 58.6
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 1.3e-72 277.3 256 59.4
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 1.7e-72 276.9 256 59.4
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 2.8e-72 276.2 256 59.0
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 3.7e-72 275.8 256 60.2
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 3.7e-72 275.8 256 59.0
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 1.1e-71 274.2 256 58.2
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.1e-71 274.2 256 58.6
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 1.1e-71 274.2 256 59.8
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 1.4e-71 273.9 262 59.2
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 1.4e-71 273.9 256 59.4
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 2.4e-71 273.1 256 57.8
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 2.4e-71 273.1 256 59.0
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 9.1e-71 271.2 264 57.2
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 1.2e-70 270.8 256 57.4
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 5.9e-70 268.5 262 55.3
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 1.3e-69 267.3 262 55.0
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 1.3e-69 267.3 256 56.2
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 5.0e-69 265.4 262 57.6
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 1.5e-68 263.8 256 57.8
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 3.2e-68 262.7 256 56.2
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 5.5e-68 261.9 256 56.6
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 7.2e-68 261.5 256 54.7
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 9.5e-68 261.2 256 55.5
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 1.2e-67 260.8 256 56.2
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 1.6e-67 260.4 256 57.8
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla HOM05D005096 ORTHO05D006566 1.6e-67 260.4 256 56.2
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 1.6e-67 260.4 256 54.7
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 2.1e-67 260.0 256 56.2
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 3.6e-67 259.2 255 55.7
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 4.7e-67 258.8 255 55.7
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 4.7e-67 258.8 256 57.4
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 6.1e-67 258.5 256 56.2
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 6.1e-67 258.5 256 56.6
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 8.0e-67 258.1 256 56.6
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 8.0e-67 258.1 256 54.7
AT1G03160 Arabidopsis thaliana HOM05D005096 ORTHO05D006566 1.0e-66 257.7 256 57.0
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 1.8e-66 256.9 256 57.4
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 2.3e-66 256.5 256 56.6
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 3.0e-66 256.1 256 55.1
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 5.2e-66 255.4 253 57.3
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 6.8e-66 255.0 256 55.1
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 8.9e-66 254.6 256 56.6
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 8.9e-66 254.6 256 54.7
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 1.2e-65 254.2 262 58.8
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 1.5e-65 253.8 256 55.1
MD11G1311700 Malus domestica HOM05D005096 ORTHO05D006566 1.5e-65 253.8 245 57.1
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 1.5e-65 253.8 256 54.3
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 2.0e-65 253.4 256 55.1
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 3.4e-65 252.7 256 56.2
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 3.4e-65 252.7 256 56.2
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 1.3e-64 250.8 256 53.1
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 1.7e-64 250.4 256 55.9
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 2.2e-64 250.0 256 53.5
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 2.8e-64 249.6 256 54.3
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 3.7e-64 249.2 256 54.3
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 4.9e-64 248.8 254 53.5
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 1.1e-63 247.7 256 53.1
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 3.1e-63 246.1 256 55.1
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 5.4e-63 245.4 256 53.5
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 9.2e-63 244.6 256 52.3
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 1.2e-62 244.2 256 53.5
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 1.6e-62 243.8 256 52.3
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 2.0e-62 243.4 256 52.7
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 2.7e-62 243.0 256 53.9
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 3.5e-62 242.7 256 53.9
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 7.8e-62 241.5 256 50.8
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 1.3e-61 240.7 256 52.0
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.3e-61 240.7 260 51.2
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 1.7e-61 240.4 256 53.1
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 8.6e-61 238.0 256 53.5
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 1.1e-60 237.7 254 51.2
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 1.9e-60 236.9 245 54.3
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 1.9e-60 236.9 257 51.0
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 1.9e-60 236.9 256 51.2
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 3.3e-60 236.1 254 52.0
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 2.1e-59 233.4 251 51.8
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 2.1e-59 233.4 256 51.2
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 3.6e-59 232.6 255 52.5
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 2.3e-58 229.9 263 52.5
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 1.2e-57 227.6 256 49.2
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 2.0e-57 226.9 263 48.3
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 2.6e-57 226.5 244 53.3
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 4.4e-57 225.7 256 48.8
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 9.8e-57 224.6 256 48.8
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 2.2e-56 223.4 256 48.0
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 2.4e-55 219.9 256 50.0
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 5.4e-55 218.8 255 47.8
Hund05340 Selenicereus undatus HOM05D005096 ORTHO05D006566 3.1e-50 203.0 217 53.0
Cpa.g.sc52.38 Carica papaya HOM05D005096 ORTHO05D006566 5.0e-45 185.7 215 49.3
Cpa.g.c40412 Carica papaya HOM05D005096 ORTHO05D006566 1.5e-44 184.1 210 50.0
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 5.6e-44 182.2 265 42.6
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 9.5e-44 181.4 264 41.3
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 6.2e-43 178.7 235 45.1
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 1.4e-42 177.6 263 41.8
AUR62043139 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.3e-37 161.0 208 44.2
Cre14.g616600 Chlamydomonas reinhardtii HOM05D005096 ORTHO05D006566 1.7e-29 134.0 249 37.3
MCO02G198 Micromonas commoda HOM05D005096 ORTHO05D006566 8.7e-29 131.7 233 37.8
PRCOL_00001755 Prasinoderma coloniale HOM05D005096 ORTHO05D006566 3.3e-28 129.8 255 34.9
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 3.6e-27 126.3 243 39.1
SEGI_20481 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 5.8e-25 119.0 221 35.3
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 9.9e-25 118.2 85 65.9
AUR62043138 Chenopodium quinoa HOM05D005096 ORTHO05D006566 3.0e-13 80.1 48 83.3
Migut.D00341 Erythranthe guttata HOM05D005096 ORTHO05D006566 2.5e-12 77.0 50 74.0
SEGI_24308 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 2.5e-12 77.0 55 69.1
MD11G1311400 Malus domestica HOM05D005096 ORTHO05D006566 8.1e-11 72.0 58 69.0
MD11G1311300 Malus domestica HOM05D005096 ORTHO05D006566 2.6e-09 67.0 60 60.0


User provided reference genes

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