Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.4e-116 422.9 202 100.0
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 1.2e-88 330.1 169 93.5
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 6.0e-64 248.1 203 61.1
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 1.2e-61 240.4 198 61.1
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 3.4e-59 232.3 195 62.1
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.7e-58 229.9 198 60.1
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 2.2e-58 229.6 198 60.6
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.4e-57 226.9 198 59.1
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 2.1e-56 223.0 207 55.1
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 4.6e-56 221.9 186 55.9
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 6.0e-56 221.5 200 56.0
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 2.3e-55 219.5 183 57.4
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 2.3e-55 219.5 191 57.6
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 1.1e-54 217.2 200 58.5
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 4.7e-53 211.8 198 53.5
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 6.2e-53 211.5 175 61.7
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 8.1e-53 211.1 195 55.9
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.2e-51 207.2 174 61.5
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.4e-51 205.3 196 57.1
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 4.9e-50 201.8 190 53.7
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 3.2e-49 199.1 199 52.3
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 1.6e-48 196.8 180 57.8
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 1.6e-48 196.8 180 57.8
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 1.6e-48 196.8 206 51.9
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 2.1e-48 196.4 181 58.6
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 2.7e-48 196.1 159 62.3
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 3.5e-48 195.7 206 48.5
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 1.0e-47 194.1 194 54.1
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 1.3e-47 193.7 196 53.1
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 3.0e-47 192.6 180 57.8
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 5.1e-47 191.8 207 49.3
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 2.8e-45 186.0 193 49.2
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.6e-45 185.7 200 48.5
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 4.7e-45 185.3 196 50.0
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 8.1e-45 184.5 195 49.2
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 1.1e-44 184.1 161 55.3
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 1.1e-44 184.1 193 48.7
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 8.9e-44 181.0 200 47.0
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.5e-43 180.3 144 58.3
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 2.0e-43 179.9 197 49.7
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 2.0e-43 179.9 205 46.8
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 2.6e-43 179.5 200 47.0
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 2.6e-43 179.5 198 49.5
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 4.4e-43 178.7 143 59.4
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 7.6e-43 177.9 196 48.0
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 7.6e-43 177.9 144 58.3
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 2.2e-42 176.4 187 51.9
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 6.4e-42 174.9 195 46.2
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 6.4e-42 174.9 136 59.6
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 1.4e-41 173.7 194 51.0
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 5.4e-41 171.8 195 46.2
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 9.3e-41 171.0 201 45.8
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 9.3e-41 171.0 182 48.4
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 1.2e-40 170.6 187 49.2
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 2.1e-40 169.9 199 44.7
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 2.7e-40 169.5 194 46.4
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 3.5e-40 169.1 174 48.3
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 7.8e-40 167.9 159 53.5
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 1.7e-39 166.8 183 47.0
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.7e-39 166.8 190 51.1
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 2.3e-39 166.4 192 47.4
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 2.3e-39 166.4 172 48.3
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 3.9e-39 165.6 201 45.3
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.5e-38 163.7 162 53.1
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 1.9e-38 163.3 183 50.8
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.9e-38 163.3 169 50.3
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 7.3e-38 161.4 202 42.6
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 2.8e-37 159.5 196 41.3
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 3.6e-37 159.1 185 44.3
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 8.1e-37 157.9 139 52.5
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 1.8e-36 156.8 187 46.5
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 3.1e-36 156.0 144 52.8
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 3.1e-36 156.0 194 45.4
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 4.0e-36 155.6 174 45.4
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 4.0e-36 155.6 204 42.2
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 4.0e-36 155.6 204 42.2
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 5.3e-36 155.2 147 49.0
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 1.2e-35 154.1 142 52.1
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.5e-35 153.7 194 42.3
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 4.4e-35 152.1 139 53.2
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 5.8e-35 151.8 179 44.7
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 9.9e-35 151.0 194 44.3
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.3e-34 150.6 200 42.0
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 1.7e-34 150.2 182 44.5
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 2.9e-34 149.4 142 50.0
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 8.4e-34 147.9 164 47.6
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 4.6e-32 142.1 189 43.9
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 5.1e-31 138.7 177 44.1
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 5.1e-31 138.7 187 41.2
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.5e-30 137.1 169 43.2
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 1.3e-29 134.0 144 44.4
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 2.8e-29 132.9 163 44.2
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 3.6e-29 132.5 159 47.8
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 6.2e-29 131.7 136 46.3
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 6.2e-29 131.7 139 40.3
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 4.0e-28 129.0 134 42.5
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 3.4e-27 125.9 133 45.1
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 1.4e-25 120.6 204 36.8
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 2.4e-25 119.8 137 43.8
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 5.4e-25 118.6 99 57.6
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 6.0e-24 115.2 206 35.4
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 1.3e-23 114.0 108 46.3
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 4.8e-21 105.5 187 40.1
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 5.8e-19 98.6 102 50.0
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 7.6e-11 71.6 60 50.0
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.7e-10 70.5 62 51.6
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.2e-08 64.3 76 42.1
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.1e-08 63.5 57 50.9
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 7.9e-08 61.6 81 40.7
CiPaw.01G042700 Carya illinoinensis HOM05D007181 ORTHO05D008722 4.3e-06 55.8 102 40.2


User provided reference genes

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