Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 4.1e-131 471.5 249 100.0
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 4.7e-119 431.4 251 92.8
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 7.8e-90 334.3 246 74.8
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 4.0e-78 295.4 246 67.1
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 3.2e-75 285.8 246 65.0
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 8.7e-73 277.7 244 63.9
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 4.3e-72 275.4 244 62.7
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 9.6e-72 274.2 244 63.1
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.8e-71 272.7 248 62.5
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 5.2e-70 268.5 264 58.3
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 9.0e-70 267.7 246 60.6
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 1.2e-69 267.3 246 61.4
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.0e-69 266.5 251 60.2
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 2.6e-69 266.2 245 60.8
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 3.8e-68 262.3 244 62.3
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.8e-68 262.3 243 64.6
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 4.9e-68 261.9 250 60.0
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 4.9e-68 261.9 244 60.7
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 6.4e-68 261.5 244 59.0
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 6.4e-68 261.5 246 61.0
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 1.1e-67 260.8 250 60.0
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.4e-67 260.4 253 59.7
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.9e-67 260.0 243 65.0
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 3.2e-67 259.2 243 62.6
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 4.2e-67 258.8 251 59.4
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.6e-66 256.9 243 60.5
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 2.1e-66 256.5 246 60.2
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 2.7e-66 256.1 245 59.6
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 3.5e-66 255.8 243 60.1
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 3.5e-66 255.8 244 59.8
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 3.5e-66 255.8 245 61.6
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 4.6e-66 255.4 246 61.0
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 4.6e-66 255.4 244 57.8
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 6.0e-66 255.0 245 61.6
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 7.8e-66 254.6 244 59.4
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.0e-65 254.2 258 58.1
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.3e-65 253.8 244 56.1
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.3e-65 253.8 244 59.4
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.3e-65 253.8 262 57.3
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 1.7e-65 253.4 245 59.6
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 3.9e-65 252.3 244 61.1
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 3.9e-65 252.3 246 58.1
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.1e-64 250.8 233 62.2
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 1.9e-64 250.0 244 57.8
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 4.3e-64 248.8 255 58.0
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 5.6e-64 248.4 245 58.0
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 5.6e-64 248.4 246 59.8
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 2.1e-63 246.5 255 56.9
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 2.8e-63 246.1 244 57.4
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 4.8e-63 245.4 251 57.8
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 1.1e-62 244.2 246 56.1
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 1.4e-62 243.8 256 55.5
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 1.5e-61 240.4 249 56.6
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 5.8e-61 238.4 295 50.5
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 4.9e-60 235.3 259 53.7
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 1.4e-59 233.8 246 60.2
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 3.5e-58 229.2 243 57.2
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 7.9e-58 228.0 220 60.0
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.3e-57 227.3 208 61.1
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 2.3e-57 226.5 244 53.3
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.0e-57 226.1 232 56.5
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 3.0e-57 226.1 245 55.5
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 3.9e-57 225.7 246 55.3
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 3.9e-57 225.7 260 54.6
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 3.9e-57 225.7 243 54.3
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 6.7e-57 224.9 210 61.4
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.9e-56 223.4 211 57.8
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 4.3e-56 222.2 251 54.2
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 9.6e-56 221.1 221 59.7
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 3.7e-55 219.2 246 55.3
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.2e-53 214.2 244 53.3
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 5.8e-53 211.8 210 61.9
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 2.9e-52 209.5 227 56.8
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 2.4e-51 206.5 209 58.4
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 9.3e-51 204.5 222 55.9
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 1.2e-50 204.1 242 51.7
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.3e-49 200.7 248 47.6
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 8.7e-49 198.0 246 49.2
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 1.3e-47 194.1 301 44.2
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 3.4e-45 186.0 238 47.1
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 1.4e-43 180.6 241 49.4
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 1.4e-43 180.6 241 49.4
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 1.4e-43 180.6 241 49.4
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 2.5e-43 179.9 240 49.2
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 2.5e-43 179.9 238 47.1
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 5.5e-43 178.7 272 45.6
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 7.1e-43 178.3 241 47.7
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.6e-42 177.2 149 67.1
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 1.6e-42 177.2 231 49.8
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 2.1e-42 176.8 238 47.1
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 2.7e-42 176.4 240 47.5
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 2.7e-42 176.4 108 85.2
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 3.5e-42 176.0 238 46.6
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 7.9e-42 174.9 241 46.9
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 7.9e-42 174.9 191 53.4
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 1.5e-40 170.6 241 46.5
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.3e-40 169.1 121 73.6
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 4.3e-40 169.1 219 50.2
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.4e-40 168.3 121 73.6
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 1.8e-38 163.7 107 78.5
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.0e-37 160.2 95 84.2
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.6e-37 159.8 119 69.7
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 3.4e-37 159.5 186 51.1
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 7.6e-37 158.3 260 40.8
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 2.9e-36 156.4 118 70.3
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 3.8e-36 156.0 214 44.4
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 1.9e-35 153.7 251 42.2
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 1.4e-33 147.5 246 43.5
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.9e-32 143.7 96 77.1
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 1.3e-31 141.0 175 49.7
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 1.7e-31 140.6 175 49.7
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 2.8e-31 139.8 250 38.8
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 5.3e-30 135.6 175 49.1
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 1.2e-29 134.4 256 37.1
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 3.0e-25 119.8 109 59.6
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 5.1e-25 119.0 268 31.7
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 4.8e-23 112.5 137 48.9
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 8.2e-23 111.7 184 43.5
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.4e-22 110.9 147 51.0
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 1.8e-22 110.5 162 45.7
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 7.0e-22 108.6 220 35.9
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 5.9e-21 105.5 158 45.6
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.5e-20 102.1 62 82.3
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 7.2e-19 98.6 62 82.3
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 1.6e-18 97.4 140 45.7
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.6e-18 96.3 159 42.8
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.6e-18 96.3 174 40.2
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.0e-17 94.7 159 44.7
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.6e-16 90.1 66 66.7
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.7e-16 89.0 189 38.1
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 9.7e-16 88.2 193 36.3
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 5.3e-14 82.4 53 73.6
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.6e-13 80.9 62 74.2
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 6.1e-10 68.9 115 44.3
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 1.8e-09 67.4 221 30.8
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 9.7e-08 61.6 56 50.0
MCO01G785 Micromonas commoda HOM05D005370 ORTHO05D006659 1.1e-06 58.2 81 34.6
QL06p015203 Quercus lobata HOM05D005370 ORTHO05D006659 5.3e-06 55.8 32 81.2


User provided reference genes

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