Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 9.7e-74 280.0 138 100.0
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 4.8e-57 224.6 114 93.9
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 1.2e-55 219.9 136 79.4
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.6e-52 209.5 138 74.6
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.1e-52 209.1 138 73.9
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.7e-52 208.8 138 73.9
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.4e-51 206.5 139 74.1
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.4e-51 206.5 138 73.9
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 1.8e-51 206.1 141 73.8
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 2.3e-51 205.7 140 74.3
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 5.2e-51 204.5 139 74.1
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.0e-50 202.6 136 73.5
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 2.0e-50 202.6 139 73.4
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 3.3e-50 201.8 138 71.7
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 4.4e-50 201.4 140 74.3
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 5.7e-50 201.1 141 70.2
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 5.7e-50 201.1 139 72.7
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 7.4e-50 200.7 136 72.8
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 9.7e-50 200.3 143 66.4
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 9.7e-50 200.3 143 66.4
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 9.7e-50 200.3 143 66.4
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 2.2e-49 199.1 137 66.4
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 6.3e-49 197.6 142 67.6
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 6.3e-49 197.6 142 67.6
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 6.3e-49 197.6 142 67.6
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 8.2e-49 197.2 143 65.0
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 8.2e-49 197.2 143 65.0
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 2.4e-48 195.7 142 71.1
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 2.4e-48 195.7 141 70.2
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 4.1e-48 194.9 142 66.9
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 4.1e-48 194.9 147 63.3
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 4.1e-48 194.9 142 66.9
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 5.3e-48 194.5 138 68.8
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 5.3e-48 194.5 147 63.9
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 7.0e-48 194.1 137 72.3
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 9.1e-48 193.7 136 72.1
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 1.2e-47 193.4 133 70.7
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 3.5e-47 191.8 141 70.9
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 5.9e-47 191.0 145 62.8
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 5.9e-47 191.0 145 64.1
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.0e-46 190.3 147 65.3
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 1.3e-46 189.9 133 69.9
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 1.7e-46 189.5 146 63.0
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 2.2e-46 189.1 132 68.9
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 2.2e-46 189.1 148 62.2
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 5.0e-46 188.0 130 67.7
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 5.0e-46 188.0 138 71.0
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 8.5e-46 187.2 147 63.9
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 1.1e-45 186.8 136 66.9
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 1.5e-45 186.4 146 63.0
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 1.5e-45 186.4 136 68.4
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.5e-45 186.4 139 69.1
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 1.9e-45 186.0 102 82.4
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.9e-45 186.0 137 68.6
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 2.5e-45 185.7 139 64.7
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 3.2e-45 185.3 138 69.6
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 5.5e-45 184.5 138 64.5
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 5.5e-45 184.5 138 64.5
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.7e-44 182.2 140 65.0
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 2.7e-44 182.2 140 65.0
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 2.7e-44 182.2 138 68.8
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 8.0e-44 180.6 132 65.9
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 8.0e-44 180.6 142 67.6
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 1.0e-43 180.3 138 62.3
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 1.4e-43 179.9 136 64.0
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 1.4e-43 179.9 136 64.0
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.4e-43 179.9 136 67.6
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 1.4e-43 179.9 114 71.1
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.4e-43 179.9 136 65.4
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 1.4e-43 179.9 132 64.4
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.4e-43 179.9 142 66.2
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 1.4e-43 179.9 132 65.9
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 1.4e-43 179.9 136 65.4
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 3.0e-43 178.7 144 64.6
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 3.0e-43 178.7 139 66.2
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 4.0e-43 178.3 132 64.4
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 5.2e-43 177.9 132 65.2
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 6.8e-43 177.6 113 69.9
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 8.8e-43 177.2 132 62.9
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 8.8e-43 177.2 141 63.8
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 8.8e-43 177.2 132 65.9
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 1.2e-42 176.8 132 62.1
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.6e-42 175.6 143 62.9
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 3.4e-42 175.3 138 64.5
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 4.4e-42 174.9 139 62.6
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 4.4e-42 174.9 140 63.6
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 7.5e-42 174.1 132 62.1
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 1.3e-41 173.3 132 62.1
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 1.7e-41 172.9 139 65.5
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.8e-41 172.2 132 61.4
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 3.7e-41 171.8 138 63.0
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 4.8e-41 171.4 132 61.4
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 7.0e-40 167.5 137 62.0
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 7.0e-40 167.5 132 61.4
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 9.1e-40 167.2 133 62.4
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.2e-39 166.8 136 63.2
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.6e-39 166.4 138 61.6
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 7.7e-39 164.1 102 74.5
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.0e-38 163.7 136 61.8
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 1.3e-38 163.3 135 60.7
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 5.0e-38 161.4 102 68.6
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 4.2e-37 158.3 99 68.7
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 5.5e-37 157.9 103 72.8
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 5.2e-35 151.4 127 59.1
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.2e-34 150.2 104 63.5
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.7e-34 147.9 105 61.9
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 8.3e-33 144.1 104 61.5
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 8.3e-33 144.1 142 54.2
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 8.3e-33 144.1 142 54.2
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 2.4e-32 142.5 101 61.4
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 2.4e-32 142.5 97 67.0
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 3.5e-31 138.7 104 57.7
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 1.5e-29 133.3 104 55.8
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 9.5e-29 130.6 108 58.3
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 1.4e-27 126.7 77 79.2
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 5.7e-26 121.3 76 71.1
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 2.2e-25 119.4 102 52.9
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 3.7e-25 118.6 104 53.8
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.8e-24 116.3 104 52.9
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 2.5e-21 105.9 59 78.0
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.3e-21 105.1 75 68.0
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.4e-19 100.1 102 47.1
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 4.0e-19 98.6 75 64.0
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 7.5e-18 94.4 98 44.9
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 4.1e-16 88.6 78 61.5
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 1.5e-10 70.1 55 61.8
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 2.6e-10 69.3 54 63.0


User provided reference genes

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