Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 3.0e-191 671.8 357 100.0
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 2.2e-106 389.8 366 62.6
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 1.2e-99 367.5 362 60.2
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 1.9e-44 184.1 354 40.7
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 4.3e-25 119.8 351 32.5
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.2e-22 111.7 350 32.3
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 2.6e-22 110.5 349 31.2
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 5.8e-22 109.4 235 39.1
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.4e-20 104.8 287 31.4
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.9e-20 104.4 294 33.0
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 2.5e-20 104.0 350 32.0
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 1.2e-19 101.7 343 28.6
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 6.7e-18 95.9 200 41.0
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.6e-16 91.3 296 30.7
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 6.3e-16 89.4 341 30.8
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 8.2e-16 89.0 361 29.4
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 6.9e-15 85.9 203 32.5
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.2e-14 85.1 295 30.5
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.2e-14 85.1 195 36.9
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 1.5e-14 84.7 358 28.8
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 1.5e-14 84.7 349 28.4
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 2.0e-14 84.3 190 33.7
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 3.4e-14 83.6 344 27.3
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 7.6e-14 82.4 292 30.5
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.0e-13 82.0 337 30.6
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 2.2e-13 80.9 350 27.7
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 8.5e-13 79.0 149 42.3
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.9e-12 77.8 334 29.3
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 3.2e-12 77.0 273 29.3
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 7.2e-12 75.9 251 32.7
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 1.2e-11 75.1 202 36.6
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 2.1e-11 74.3 349 28.1
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 2.1e-11 74.3 295 29.8
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 2.1e-11 74.3 271 29.2
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 2.7e-11 73.9 247 30.4
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 2.7e-11 73.9 217 33.6
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 2.7e-11 73.9 352 29.0
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 3.6e-11 73.6 83 49.4
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 6.1e-11 72.8 144 40.3
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.3e-10 71.6 174 35.1
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.8e-10 71.2 198 37.4
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 3.0e-10 70.5 181 32.0
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 3.9e-10 70.1 93 45.2
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 6.7e-10 69.3 268 27.6
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 6.7e-10 69.3 204 34.8
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 6.7e-10 69.3 178 36.0
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 8.8e-10 68.9 277 29.2
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 1.1e-09 68.6 281 27.0
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 1.1e-09 68.6 177 33.3
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 1.5e-09 68.2 220 33.6
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 1.5e-09 68.2 392 26.3
Duzib093G0245 Durio zibethinus HOM05D007760 ORTHO05D008337 1.9e-09 67.8 218 29.4
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 1.9e-09 67.8 352 28.7
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.9e-09 67.8 199 31.2
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 3.3e-09 67.0 174 32.2
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 3.3e-09 67.0 144 40.3
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.3e-09 66.6 238 29.4
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 5.7e-09 66.2 171 36.8
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 7.4e-09 65.9 292 28.8
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 9.7e-09 65.5 281 27.8
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.3e-08 65.1 291 27.5
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.2e-08 64.3 241 28.6
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 2.2e-08 64.3 269 27.9
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 6.3e-08 62.8 204 30.4
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 1.1e-07 62.0 227 29.1
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 1.1e-07 62.0 291 28.9
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 1.1e-07 62.0 277 26.7
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 1.4e-07 61.6 178 33.1
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.4e-07 61.6 205 30.7
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 1.4e-07 61.6 293 27.3
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 4.1e-07 60.1 259 28.6
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 5.3e-07 59.7 180 33.9
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 5.3e-07 59.7 235 26.8
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 9.1e-07 58.9 166 33.1
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.2e-06 58.5 205 29.3
ECA233G1679 Erigeron canadensis HOM05D022491 ORTHO05D000476 1.5e-06 58.2 242 26.9
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 2.6e-06 57.4 272 30.1
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 3.4e-06 57.0 166 32.5
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 3.4e-06 57.0 173 31.8


User provided reference genes

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