Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 1.4e-81 306.2 158 100.0
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.4e-73 279.6 154 92.9
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.8e-60 236.1 158 77.8
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 1.9e-57 226.1 157 75.2
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 6.1e-56 221.1 152 74.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 1.4e-55 219.9 151 74.2
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 6.7e-55 217.6 157 72.6
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 1.5e-54 216.5 154 69.5
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 2.6e-54 215.7 150 68.7
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 4.4e-54 214.9 153 72.5
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 5.7e-54 214.5 153 70.6
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 5.7e-54 214.5 153 72.5
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 7.5e-54 214.2 140 77.9
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 9.7e-54 213.8 153 72.5
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 2.2e-53 212.6 153 71.2
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 2.8e-53 212.2 154 72.1
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 2.8e-53 212.2 154 72.1
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 3.7e-53 211.8 152 72.4
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 4.8e-53 211.5 159 71.7
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 6.3e-53 211.1 154 72.1
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 6.3e-53 211.1 153 70.6
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 8.2e-53 210.7 154 72.1
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 1.1e-52 210.3 154 68.2
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.8e-52 209.5 153 66.7
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 2.4e-52 209.1 153 68.0
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 5.3e-52 208.0 152 71.1
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 5.3e-52 208.0 156 66.0
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 7.0e-52 207.6 140 76.4
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 9.1e-52 207.2 148 74.3
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 9.1e-52 207.2 157 70.1
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.2e-51 206.8 155 70.3
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.6e-51 206.5 130 74.6
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 2.0e-51 206.1 152 69.1
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 2.7e-51 205.7 123 80.5
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 2.7e-51 205.7 155 70.3
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 3.5e-51 205.3 157 68.2
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.5e-51 205.3 131 79.4
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 5.9e-51 204.5 131 78.6
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 7.7e-51 204.1 154 68.2
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 1.0e-50 203.8 139 75.5
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.3e-50 203.4 131 80.9
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 1.3e-50 203.4 152 65.1
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 2.2e-50 202.6 153 67.3
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 3.8e-50 201.8 123 77.2
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 3.8e-50 201.8 151 62.9
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 5.0e-50 201.4 130 73.1
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 5.0e-50 201.4 158 68.4
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 8.5e-50 200.7 151 62.9
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.5e-49 199.9 150 62.7
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 2.5e-49 199.1 149 67.1
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 3.2e-49 198.7 158 65.8
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 4.2e-49 198.4 151 64.9
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 5.5e-49 198.0 126 74.6
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 5.5e-49 198.0 139 71.9
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 9.4e-49 197.2 152 69.7
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 9.4e-49 197.2 125 75.2
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 9.4e-49 197.2 135 72.6
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.2e-48 196.8 151 62.3
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 1.6e-48 196.4 157 67.5
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 1.6e-48 196.4 139 70.5
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.6e-48 196.4 131 76.3
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.6e-48 196.4 154 65.6
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 2.7e-48 195.7 152 63.2
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 2.7e-48 195.7 126 77.0
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 3.6e-48 195.3 123 78.0
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 4.7e-48 194.9 123 75.6
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 1.0e-47 193.7 154 66.2
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 1.8e-47 193.0 150 64.7
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 2.3e-47 192.6 124 77.4
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.3e-47 192.6 151 60.9
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 3.0e-47 192.2 150 61.3
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 4.0e-47 191.8 130 73.1
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.5e-46 189.9 157 65.0
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 2.0e-46 189.5 151 60.3
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.0e-46 189.5 128 67.2
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.7e-45 186.4 154 66.2
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 1.7e-45 186.4 149 65.1
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 4.8e-45 184.9 142 66.9
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 4.8e-45 184.9 154 66.2
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 6.3e-45 184.5 158 63.9
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 8.3e-45 184.1 146 65.1
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 2.0e-43 179.5 124 75.0
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 2.0e-43 179.5 153 64.7
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 5.9e-43 177.9 149 62.4
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 2.2e-42 176.0 152 63.8
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 6.5e-42 174.5 156 62.8
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 6.5e-42 174.5 124 71.8
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 8.5e-42 174.1 154 60.4
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 8.5e-42 174.1 154 62.3
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 1.1e-41 173.7 145 61.4
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 1.1e-41 173.7 139 62.6
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.2e-41 172.2 131 69.5
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 5.5e-41 171.4 145 61.4
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 2.7e-40 169.1 147 64.6
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 6.1e-40 167.9 132 62.9
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 6.1e-40 167.9 150 60.0
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 1.4e-39 166.8 127 66.9
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.4e-39 166.8 148 62.8
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 3.0e-39 165.6 130 66.9
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 3.4e-38 162.2 126 64.3
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 5.7e-38 161.4 127 63.0
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.3e-37 160.2 126 64.3
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 1.8e-36 156.4 152 57.2
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 1.8e-36 156.4 151 56.3
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 2.4e-36 156.0 152 57.2
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.6e-35 153.3 134 61.2
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 2.7e-35 152.5 129 63.6
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 1.4e-31 140.2 103 70.9
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 9.8e-30 134.0 152 52.0
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 1.7e-29 133.3 121 51.2
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 2.7e-27 125.9 122 52.5
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 7.3e-25 117.9 137 47.4
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 5.8e-22 108.2 103 56.3
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 7.5e-22 107.8 149 45.0
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.3e-21 107.1 156 41.7
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 3.7e-21 105.5 117 49.6
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.1e-20 104.0 127 48.0
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.6e-19 100.1 99 54.5
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 6.6e-18 94.7 92 57.6
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 7.3e-17 91.3 81 50.6
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 4.0e-15 85.5 118 38.1
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.3e-13 80.5 116 44.0
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 2.4e-12 76.3 84 56.0
BcaC08g47102 Brassica carinata HOM05D006402 ORTHO05D008099 1.9e-09 66.6 62 58.1
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 3.3e-09 65.9 49 75.5


User provided reference genes

Program Settings