Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G016401 Populus trichocarpa HOM05D005628 ORTHO05D007348 4.7e-51 204.1 97 100.0
Sabra05G0189800 Salix brachista HOM05D005628 ORTHO05D007348 6.2e-35 150.6 87 81.6
Potri.005G245700 Populus trichocarpa HOM05D005628 ORTHO05D007348 6.9e-34 147.1 87 80.5
Actinidia37955 Actinidia chinensis HOM05D005628 ORTHO05D007348 8.4e-32 140.2 81 79.0
Duzib116G0718 Durio zibethinus HOM05D005628 ORTHO05D007348 1.1e-31 139.8 81 79.0
COL.COLO4_26082 Corchorus olitorius HOM05D005628 ORTHO05D007348 1.4e-31 139.4 81 80.2
Manes.05G142400 Manihot esculenta HOM05D005628 ORTHO05D007348 1.4e-31 139.4 87 74.7
BcaC08g47301 Brassica carinata HOM05D005628 ORTHO05D007348 1.9e-31 139.0 89 74.2
A07p41640 Brassica napus HOM05D005628 ORTHO05D007348 1.9e-31 139.0 89 74.2
BraA07t31693Z Brassica rapa HOM05D005628 ORTHO05D007348 1.9e-31 139.0 89 74.2
TWI36G0492 Tripterygium wilfordii HOM05D005628 ORTHO05D007348 1.9e-31 139.0 81 80.2
Cfa014012 Carpinus fangiana HOM05D005628 ORTHO05D007348 5.4e-31 137.5 89 70.8
Rhsim07G0251100 Rhododendron simsii HOM05D005628 ORTHO05D007348 5.4e-31 137.5 81 77.8
Thecc.08G051900 Theobroma cacao HOM05D005628 ORTHO05D007348 5.4e-31 137.5 81 76.5
TAR376G1006 Trochodendron aralioides HOM05D005628 ORTHO05D007348 5.4e-31 137.5 81 79.0
Actinidia29770 Actinidia chinensis HOM05D005628 ORTHO05D007348 7.1e-31 137.1 87 73.6
Oeu007384.1 Olea europaea HOM05D005628 ORTHO05D007348 7.1e-31 137.1 88 71.6
AL2G36120 Arabidopsis lyrata HOM05D005628 ORTHO05D007348 9.3e-31 136.7 89 73.0
AT1G76080 Arabidopsis thaliana HOM05D005628 ORTHO05D007348 9.3e-31 136.7 89 73.0
C06p50020 Brassica napus HOM05D005628 ORTHO05D007348 9.3e-31 136.7 89 73.0
Sp5g31200 Schrenkiella parvula HOM05D005628 ORTHO05D007348 9.3e-31 136.7 91 72.5
BolC6t40041H Brassica oleracea HOM05D005628 ORTHO05D007348 1.6e-30 136.0 89 71.9
Thhalv10018920m.g Eutrema salsugineum HOM05D005628 ORTHO05D007348 1.6e-30 136.0 89 71.9
vmacro04380 Vaccinium macrocarpon HOM05D005628 ORTHO05D007348 1.6e-30 136.0 81 76.5
Cc10_g01120 Coffea canephora HOM05D005628 ORTHO05D007348 2.1e-30 135.6 81 77.8
Carub.0002s2297 Capsella rubella HOM05D005628 ORTHO05D007348 2.7e-30 135.2 89 71.9
Ca_13486_v3 Cicer arietinum L. HOM05D005628 ORTHO05D007348 2.7e-30 135.2 87 70.1
QL02p012950 Quercus lobata HOM05D005628 ORTHO05D007348 3.5e-30 134.8 81 77.8
MBI05_g13277_MAGBIO Magnolia biondii HOM05D005628 ORTHO05D007348 4.6e-30 134.4 81 76.5
Prupe.1G359300 Prunus persica HOM05D005628 ORTHO05D007348 4.6e-30 134.4 81 79.0
Haze_22711 Corylus avellana HOM05D005628 ORTHO05D007348 6.0e-30 134.0 89 68.5
arahy.Tifrunner.gnm1.ann1.KUZ5B2 Arachis hypogaea HOM05D005628 ORTHO05D007348 1.0e-29 133.3 89 67.4
PSO170G4881 Papaver somniferum HOM05D005628 ORTHO05D007348 1.0e-29 133.3 81 75.3
PSO210G2114 Papaver somniferum HOM05D005628 ORTHO05D007348 1.0e-29 133.3 81 75.3
CiPaw.07G143500 Carya illinoinensis HOM05D005628 ORTHO05D007348 1.3e-29 132.9 81 77.8
TWI56G0240 Tripterygium wilfordii HOM05D005628 ORTHO05D007348 1.3e-29 132.9 81 75.3
arahy.Tifrunner.gnm1.ann1.W1N14J Arachis hypogaea HOM05D005628 ORTHO05D007348 1.8e-29 132.5 89 67.4
Hma1.2p1_1598F.1_g292970 Hydrangea macrophylla HOM05D005628 ORTHO05D007348 1.8e-29 132.5 81 75.3
Ciclev10001692m.g Citrus clementina HOM05D005628 ORTHO05D007348 2.3e-29 132.1 87 69.0
FAN20G0939 Fragaria x ananassa HOM05D005628 ORTHO05D007348 2.3e-29 132.1 81 76.5
FAN27G2668 Fragaria x ananassa HOM05D005628 ORTHO05D007348 2.3e-29 132.1 81 76.5
MD08G1007500 Malus domestica HOM05D005628 ORTHO05D007348 2.3e-29 132.1 81 75.3
Atru.chr13.215 Acer truncatum HOM05D005628 ORTHO05D007348 3.0e-29 131.7 81 75.3
CARHR069620 Cardamine hirsuta HOM05D005628 ORTHO05D007348 3.0e-29 131.7 89 70.8
Dinv31894 Davidia involucrata HOM05D005628 ORTHO05D007348 3.0e-29 131.7 81 74.1
Aqoxy5G01095 Aquilegia oxysepala HOM05D005628 ORTHO05D007348 3.9e-29 131.3 81 75.3
Cpa.g.sc26.263 Carica papaya HOM05D005628 ORTHO05D007348 3.9e-29 131.3 80 77.5
MD15G1006700 Malus domestica HOM05D005628 ORTHO05D007348 3.9e-29 131.3 81 75.3
Nn5g30848 Nelumbo nucifera HOM05D005628 ORTHO05D007348 3.9e-29 131.3 81 75.3
RcHm_v2.0_Chr6g0303681 Rosa chinensis HOM05D005628 ORTHO05D007348 3.9e-29 131.3 81 75.3
ClCG08G014020 Citrullus lanatus HOM05D005628 ORTHO05D007348 5.1e-29 131.0 81 74.1
Gohir.A05G182700 Gossypium hirsutum HOM05D005628 ORTHO05D007348 5.1e-29 131.0 81 74.1
Gohir.D05G185700 Gossypium hirsutum HOM05D005628 ORTHO05D007348 5.1e-29 131.0 81 74.1
Gorai.009G191100 Gossypium raimondii HOM05D005628 ORTHO05D007348 5.1e-29 131.0 81 74.1
Lj4C17T5 Lonicera japonica HOM05D005628 ORTHO05D007348 5.1e-29 131.0 87 67.8
Hund01723 Selenicereus undatus HOM05D005628 ORTHO05D007348 6.7e-29 130.6 88 68.2
MSTRG.25277 Avicennia marina HOM05D005628 ORTHO05D007348 8.7e-29 130.2 81 74.1
FAN15G2092 Fragaria x ananassa HOM05D005628 ORTHO05D007348 8.7e-29 130.2 81 75.3
CANSAT64G0481 Cannabis sativa HOM05D005628 ORTHO05D007348 1.1e-28 129.8 87 66.7
FvH4_2g37930 Fragaria vesca HOM05D005628 ORTHO05D007348 1.1e-28 129.8 81 75.3
Sc15g0004660 Simmondsia chinensis HOM05D005628 ORTHO05D007348 1.1e-28 129.8 81 70.4
CAN.G311.75 Capsicum annuum HOM05D005628 ORTHO05D007348 1.5e-28 129.4 87 66.7
PGR031G3420 Punica granatum HOM05D005628 ORTHO05D007348 1.5e-28 129.4 81 74.1
TPR.G26414 Trifolium pratense HOM05D005628 ORTHO05D007348 1.5e-28 129.4 81 74.1
Lalb_Chr03g0033571 Lupinus albus HOM05D005628 ORTHO05D007348 2.5e-28 128.6 81 72.8
Sed0003076 Sechium edule HOM05D005628 ORTHO05D007348 2.5e-28 128.6 81 71.6
AUR62036715 Chenopodium quinoa HOM05D005628 ORTHO05D007348 3.3e-28 128.3 87 66.7
Solyc04g081970.3 Solanum lycopersicum HOM05D005628 ORTHO05D007348 3.3e-28 128.3 81 71.6
Sopen04g035620 Solanum pennellii HOM05D005628 ORTHO05D007348 3.3e-28 128.3 81 71.6
PGSC0003DMG400009956 Solanum tuberosum HOM05D005628 ORTHO05D007348 3.3e-28 128.3 81 71.6
THA.LOC104811445 Tarenaya hassleriana HOM05D005628 ORTHO05D007348 3.3e-28 128.3 87 69.0
CsaV3_2G024440 Cucumis sativus L. HOM05D005628 ORTHO05D007348 4.3e-28 127.9 81 72.8
Medtr1g026125 Medicago truncatula HOM05D005628 ORTHO05D007348 4.3e-28 127.9 81 71.6
Lj5g0010043 Lotus japonicus HOM05D005628 ORTHO05D007348 5.6e-28 127.5 81 71.6
Aa31LG4G6200 Aethionema arabicum HOM05D005628 ORTHO05D007348 7.4e-28 127.1 79 75.9
CiPaw.08G069300 Carya illinoinensis HOM05D005628 ORTHO05D007348 7.4e-28 127.1 81 75.3
CSS0034642 Camellia sinensis var. sinensis HOM05D005628 ORTHO05D007348 9.6e-28 126.7 73 80.8
DCAR_009514 Daucus carota HOM05D005628 ORTHO05D007348 9.6e-28 126.7 81 72.8
unitig_749.g13905 Utricularia gibba HOM05D005628 ORTHO05D007348 9.6e-28 126.7 81 72.8
Eucgr.F03707 Eucalyptus grandis HOM05D005628 ORTHO05D007348 1.3e-27 126.3 81 70.4
EL10Ac1g02081 Beta vulgaris HOM05D005628 ORTHO05D007348 2.1e-27 125.6 87 64.4
AUR62013879 Chenopodium quinoa HOM05D005628 ORTHO05D007348 2.8e-27 125.2 81 70.4
ECA232G2943 Erigeron canadensis HOM05D005628 ORTHO05D007348 2.8e-27 125.2 81 71.6
Glyma.14G222500 Glycine max HOM05D005628 ORTHO05D007348 4.8e-27 124.4 83 69.9
Lsat_1_v5_gn_0_661 Lactuca sativa HOM05D005628 ORTHO05D007348 4.8e-27 124.4 81 71.6
Psat6g000840 Pisum sativum HOM05D005628 ORTHO05D007348 4.8e-27 124.4 81 69.1
MELO3C011340.2 Cucumis melo HOM05D005628 ORTHO05D007348 6.2e-27 124.0 81 71.6
Migut.C00901 Erythranthe guttata HOM05D005628 ORTHO05D007348 6.2e-27 124.0 81 70.4
BcaC08g47300 Brassica carinata HOM05D005628 ORTHO05D007348 1.8e-26 122.5 89 68.5
HanXRQChr05g0146641 Helianthus annuus HOM05D005628 ORTHO05D007348 5.3e-26 120.9 81 71.6
Phvul.001G002100 Phaseolus vulgaris HOM05D005628 ORTHO05D007348 5.3e-26 120.9 83 67.5
HPP92_014531 Vanilla planifolia HOM05D005628 ORTHO05D007348 5.3e-26 120.9 88 60.2
Os07g0476900 Oryza sativa ssp. japonica HOM05D005628 ORTHO05D007348 1.5e-25 119.4 79 69.6
PSO170G2194 Papaver somniferum HOM05D005628 ORTHO05D007348 5.8e-25 117.5 88 63.6
VMungo0647G1170 Vigna mungo HOM05D005628 ORTHO05D007348 5.8e-25 117.5 83 66.3
SGA_v2.0_scaffold145G36102 Striga asiatica HOM05D005628 ORTHO05D007348 7.6e-25 117.1 81 66.7
ATR0661G503 Amborella trichopoda HOM05D005628 ORTHO05D007348 3.8e-24 114.8 89 59.6
PSO017G6535 Papaver somniferum HOM05D005628 ORTHO05D007348 1.4e-23 112.8 88 62.5
SEGI_09368 Sequoiadendron giganteum HOM05D005628 ORTHO05D007348 1.9e-23 112.5 88 59.1
PSO339G4729 Papaver somniferum HOM05D005628 ORTHO05D007348 4.2e-23 111.3 89 57.3
Zm00001eb319950 Zea mays HOM05D005628 ORTHO05D007348 1.2e-22 109.8 88 59.1
PSO648G0024 Papaver somniferum HOM05D005628 ORTHO05D007348 1.6e-22 109.4 82 63.4
PSO648G0070 Papaver somniferum HOM05D005628 ORTHO05D007348 1.6e-22 109.4 82 63.4
PSO648G0080 Papaver somniferum HOM05D005628 ORTHO05D007348 1.6e-22 109.4 82 63.4
PSO795G0001 Papaver somniferum HOM05D005628 ORTHO05D007348 1.6e-22 109.4 82 63.4
BcaC08g47294 Brassica carinata HOM05D005628 ORTHO05D007348 4.6e-22 107.8 89 62.9
SMO356G0420 Selaginella moellendorffii HOM05D005628 ORTHO05D007348 3.0e-21 105.1 87 58.6
Mapoly0024s0029 Marchantia polymorpha HOM05D005628 ORTHO05D007348 1.4e-18 96.3 81 53.1
Pp3c13_21520 Physcomitrium patens HOM05D005628 ORTHO05D007348 6.9e-18 94.0 81 54.3
Nitab4.5_0003030g0070 Nicotiana tabacum HOM05D005628 ORTHO05D007348 1.5e-17 92.8 81 58.0
CBR_g26413 Chara braunii HOM05D005628 ORTHO05D007348 5.8e-17 90.9 82 47.6
CDE02G2619 Ceratophyllum demersum HOM05D005628 ORTHO05D007348 2.1e-14 82.4 50 74.0
Lj9P400T45 Lonicera japonica HOM05D005628 ORTHO05D007348 1.0e-13 80.1 72 51.4
Peaxi162Scf00174g00813 Petunia axillaris HOM05D005628 ORTHO05D007348 2.5e-12 75.5 48 68.8
C02p33470 Brassica napus HOM05D005628 ORTHO05D007348 3.7e-11 71.6 74 51.4
Migut.B00054 Erythranthe guttata HOM05D005628 ORTHO05D007348 4.8e-11 71.2 77 45.5
SGA_v2.0_scaffold58G20340 Striga asiatica HOM05D005628 ORTHO05D007348 1.3e-08 63.2 83 38.6
BcaC03g15644 Brassica carinata HOM05D005628 ORTHO05D007348 1.1e-07 60.1 48 58.3
BolC2t09357H Brassica oleracea HOM05D005628 ORTHO05D007348 1.1e-07 60.1 48 58.3
Ah.00g000640 Amaranthus hybridus HOM05D005628 ORTHO05D007348 7.2e-07 57.4 43 60.5


User provided reference genes

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