Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.7e-109 399.4 209 100.0
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 3.3e-94 348.6 209 87.6
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 6.3e-85 317.8 209 80.9
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 7.0e-84 314.3 207 78.7
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 5.4e-68 261.5 209 68.4
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 5.4e-68 261.5 213 69.5
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 3.0e-66 255.8 211 71.1
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 3.3e-65 252.3 209 66.5
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 7.3e-65 251.1 212 64.6
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 9.5e-65 250.8 210 67.1
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 8.0e-64 247.7 212 65.1
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 2.3e-63 246.1 210 64.8
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.4e-62 241.9 213 64.3
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 4.4e-62 241.9 209 64.1
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 2.2e-61 239.6 211 65.4
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 5.4e-60 235.0 213 67.6
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 7.0e-60 234.6 208 62.0
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.6e-59 233.4 210 65.2
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 7.8e-59 231.1 210 63.8
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 3.0e-58 229.2 208 62.0
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 3.0e-58 229.2 214 66.4
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.5e-57 226.9 215 63.3
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.3e-57 225.3 215 60.5
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.3e-57 224.6 215 62.8
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 7.3e-57 224.6 215 62.8
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.1e-56 223.0 210 62.9
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.8e-55 219.9 214 64.0
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 3.1e-55 219.2 216 61.6
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.2e-54 217.2 213 60.6
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 4.4e-54 215.3 214 61.2
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.9e-53 212.6 209 61.2
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 4.9e-53 211.8 214 59.8
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.9e-52 209.9 211 61.1
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.9e-52 209.9 209 60.8
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.5e-51 205.7 189 65.6
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 4.6e-51 205.3 214 59.3
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.7e-50 203.4 216 58.8
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 8.6e-50 201.1 212 57.5
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 8.6e-50 201.1 215 56.3
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 3.3e-49 199.1 212 59.4
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 1.6e-48 196.8 216 54.2
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 2.8e-48 196.1 204 58.8
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.4e-47 193.7 219 54.8
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.8e-47 193.4 212 57.5
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 2.4e-47 193.0 209 56.5
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 4.0e-47 192.2 225 56.9
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.4e-46 189.1 192 59.4
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 9.9e-46 187.6 209 56.0
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 8.4e-45 184.5 214 56.1
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.1e-44 184.1 219 56.2
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.2e-44 182.6 219 53.9
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.2e-43 180.6 219 54.3
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 3.5e-43 179.1 218 55.0
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 6.6e-42 174.9 213 51.6
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 6.6e-42 174.9 213 53.1
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.5e-41 173.7 202 54.5
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 4.3e-41 172.2 213 53.5
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 4.3e-41 172.2 212 54.7
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.1e-40 169.9 218 51.4
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 2.8e-40 169.5 212 54.2
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 1.1e-39 167.5 213 50.2
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.4e-39 167.2 217 51.6
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.2e-38 164.1 209 50.7
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.5e-38 163.7 212 53.3
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.0e-38 163.3 221 48.9
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 2.0e-38 163.3 246 48.4
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 4.4e-38 162.2 218 52.8
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 2.2e-37 159.8 213 50.2
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.2e-37 159.8 194 52.1
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 2.9e-37 159.5 146 64.4
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 3.8e-37 159.1 216 51.4
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 4.9e-37 158.7 207 51.7
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.1e-35 153.3 211 50.7
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 2.7e-35 152.9 221 49.8
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 3.5e-35 152.5 224 49.6
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 1.3e-34 150.6 124 67.7
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.7e-34 150.2 199 52.3
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 3.0e-34 149.4 210 49.5
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 6.6e-34 148.3 222 48.2
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 6.6e-34 148.3 216 48.6
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 4.3e-33 145.6 210 48.6
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 7.3e-33 144.8 221 50.7
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.6e-32 143.7 219 45.7
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 5.3e-31 138.7 221 48.0
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 6.9e-31 138.3 225 45.3
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 4.5e-30 135.6 215 46.0
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.3e-29 134.0 210 47.6
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 1.7e-29 133.7 227 46.3
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 1.7e-29 133.7 226 44.2
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.9e-29 132.9 213 43.7
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.9e-29 132.9 211 45.5
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 2.9e-29 132.9 230 46.5
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.9e-29 132.9 189 47.1
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 6.4e-29 131.7 186 48.4
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.4e-28 130.6 178 49.4
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.4e-28 130.6 178 49.4
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 2.4e-28 129.8 216 47.7
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 3.2e-28 129.4 217 47.9
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 4.2e-28 129.0 215 47.0
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 4.2e-28 129.0 215 47.0
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 5.4e-28 128.6 216 47.2
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 2.1e-27 126.7 223 43.0
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 2.1e-27 126.7 219 46.6
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.3e-26 124.0 211 44.1
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 2.3e-26 123.2 208 43.8
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 2.3e-26 123.2 223 42.2
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 3.0e-26 122.9 215 45.6
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 5.1e-26 122.1 212 45.3
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 6.7e-26 121.7 221 44.8
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.4e-23 114.0 170 48.8
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 9.0e-23 111.3 214 41.1
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 3.4e-22 109.4 218 41.3
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.8e-22 108.6 145 48.3
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 1.0e-21 107.8 102 59.8
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 4.9e-21 105.5 183 44.3
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 8.4e-21 104.8 87 63.2
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 3.5e-19 99.4 179 39.7
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 6.0e-19 98.6 224 40.6
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.9e-17 93.6 171 40.9
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 9.6e-17 91.3 150 42.0
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 9.6e-17 91.3 150 42.0
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 4.5e-14 82.4 172 43.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.3e-13 80.9 172 41.3
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 1.3e-13 80.9 209 37.8
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.3e-13 80.9 172 41.3
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.3e-13 80.9 173 38.7
Thecc.04G308600 Theobroma cacao HOM05D005571 ORTHO05D006919 5.0e-13 79.0 81 55.6
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 1.6e-11 73.9 189 39.2
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.7e-11 73.2 166 39.8
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 6.1e-11 72.0 112 45.5
Thecc.06G128900 Theobroma cacao HOM05D005571 ORTHO05D006919 7.9e-11 71.6 75 54.7
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 1.0e-10 71.2 207 36.7
Thecc.07G149400 Theobroma cacao HOM05D005571 ORTHO05D004433 8.7e-10 68.2 69 58.0
Os07g0474300 Oryza sativa ssp. japonica HOM05D033341 ORTHO05D036979 1.9e-09 67.0 247 33.6
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 4.1e-07 59.3 113 42.5
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 4.1e-07 59.3 113 42.5
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 2.0e-06 57.0 101 39.6
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.6e-06 56.6 211 31.8
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 5.9e-06 55.5 114 41.2
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 5.9e-06 55.5 114 41.2


User provided reference genes

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