Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 0.0e+00 1166.4 742 100.0
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 4.7e-300 1034.2 759 87.2
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 2.2e-180 636.7 770 54.5
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 3.6e-175 619.4 779 57.8
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 9.8e-173 611.3 745 57.7
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 1.9e-171 607.1 673 56.6
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 3.3e-168 596.3 803 51.9
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.2e-165 587.8 860 51.9
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 6.4e-164 582.0 749 56.2
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 3.5e-162 576.2 564 64.0
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 9.9e-157 558.1 768 54.7
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.7e-156 557.4 747 54.9
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.2e-156 557.0 750 50.3
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.2e-156 557.0 776 53.6
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 3.8e-156 556.2 802 52.1
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 8.4e-156 555.1 544 59.0
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.3e-153 547.0 778 54.5
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 1.5e-152 544.3 775 53.9
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 5.8e-149 532.3 564 55.7
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 7.6e-149 531.9 750 48.3
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 9.9e-149 531.6 748 47.2
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 4.9e-148 529.3 551 56.4
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 3.5e-146 523.1 747 52.6
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 1.7e-145 520.8 585 54.2
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 6.6e-145 518.8 585 53.8
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 8.7e-145 518.5 771 50.1
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.6e-143 514.2 749 53.4
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.8e-143 513.5 827 48.6
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 3.6e-143 513.1 755 52.3
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 8.1e-143 511.9 542 60.7
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 4.0e-142 509.6 541 56.2
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.2e-141 508.1 572 53.3
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.6e-141 505.4 733 49.7
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 2.9e-140 503.4 795 43.0
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 4.9e-140 502.7 545 58.5
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 9.3e-139 498.4 811 44.0
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.9e-136 490.7 839 44.5
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 3.7e-135 486.5 811 44.6
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 1.4e-134 484.6 801 47.1
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 5.3e-134 482.6 611 49.1
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 6.9e-134 482.3 754 50.1
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 9.0e-134 481.9 682 46.5
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.9e-132 476.9 665 46.5
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.2e-131 473.0 816 43.6
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 1.0e-129 468.4 736 45.2
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 3.0e-129 466.8 821 41.7
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 5.1e-129 466.1 537 53.1
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 2.0e-125 454.1 757 45.3
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 2.6e-125 453.8 820 41.0
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.7e-124 451.1 818 40.1
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 1.7e-124 451.1 756 49.3
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 7.9e-122 442.2 608 47.9
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 8.7e-121 438.7 753 42.2
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 1.1e-120 438.3 481 58.6
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.9e-120 437.6 754 42.6
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 1.3e-119 434.9 778 41.8
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 2.8e-119 433.7 572 47.4
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 2.8e-119 433.7 783 41.1
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 5.9e-117 426.0 751 47.3
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 2.2e-116 424.1 543 52.3
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 5.5e-115 419.5 788 40.1
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 9.4e-115 418.7 757 41.0
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 3.0e-113 413.7 743 41.7
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 1.5e-112 411.4 746 43.0
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 2.5e-112 410.6 740 40.4
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 9.7e-112 408.7 770 41.4
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.4e-110 404.8 492 48.6
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.4e-110 404.1 769 38.9
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 2.4e-110 404.1 769 38.9
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 6.9e-110 402.5 749 40.6
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 9.1e-110 402.1 575 49.6
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 2.2e-108 397.5 477 50.7
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.8e-105 387.9 750 39.6
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.7e-98 364.0 404 54.7
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 5.3e-94 349.7 427 51.3
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 1.9e-91 341.3 795 40.1
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 2.1e-90 337.8 580 40.5
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 3.8e-84 317.0 513 41.9
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 3.4e-80 303.9 443 44.9
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.5e-72 278.5 539 36.9
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 1.8e-70 271.6 767 33.8
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 5.4e-70 270.0 380 49.2
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 4.6e-69 266.9 627 35.1
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 5.9e-69 266.5 268 62.3
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 2.3e-68 264.6 748 35.2
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 3.0e-60 237.7 499 38.1
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 1.4e-57 228.8 550 35.1
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 4.3e-51 207.2 557 36.6
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 3.6e-50 204.1 311 46.3
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 5.8e-40 170.2 548 27.2
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 4.8e-34 150.6 183 51.9
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.6e-29 134.0 121 59.5
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 3.9e-28 131.0 327 33.9
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 4.2e-22 110.9 121 54.5
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.3e-20 105.9 197 45.7
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.8e-18 98.2 212 38.2
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.4e-16 91.3 137 41.6
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.9e-14 85.5 76 64.5
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 2.5e-14 85.1 70 62.9
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 5.5e-14 84.0 80 56.2
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 9.3e-14 83.2 80 56.2
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 1.6e-13 82.4 127 43.3
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.7e-11 73.9 87 49.4
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 1.8e-09 68.9 129 39.5


User provided reference genes

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