Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.8e-88 329.3 176 100.0
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 4.0e-72 275.0 171 87.1
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 6.1e-65 251.1 271 57.9
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 8.3e-46 187.6 161 68.9
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 3.9e-43 178.7 177 59.3
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 5.6e-42 174.9 126 74.6
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 5.6e-42 174.9 139 69.8
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.7e-41 171.8 144 66.7
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 8.1e-41 171.0 144 66.7
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 5.2e-40 168.3 114 74.6
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 1.5e-39 166.8 117 73.5
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 5.8e-39 164.9 157 56.7
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 9.9e-39 164.1 157 56.1
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.2e-38 162.9 111 73.0
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 4.1e-37 158.7 118 68.6
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 3.5e-36 155.6 115 70.4
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.6e-36 155.2 174 58.0
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 4.6e-36 155.2 118 67.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 4.6e-36 155.2 118 67.8
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 6.0e-36 154.8 149 56.4
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 6.0e-36 154.8 145 57.9
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 7.8e-36 154.5 120 63.3
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 1.0e-35 154.1 152 55.9
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 1.0e-35 154.1 152 55.9
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.0e-35 154.1 108 72.2
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.0e-35 154.1 120 65.8
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.3e-35 153.7 149 56.4
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.7e-35 153.3 116 69.8
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 1.7e-35 153.3 149 55.7
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.7e-35 153.3 125 63.2
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.7e-35 153.3 118 66.9
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 1.7e-35 153.3 125 68.8
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 2.3e-35 152.9 120 63.3
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 5.1e-35 151.8 120 63.3
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 5.1e-35 151.8 109 68.8
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 5.1e-35 151.8 121 64.5
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 8.6e-35 151.0 149 55.0
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 1.1e-34 150.6 146 58.9
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.5e-34 150.2 119 63.0
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 2.5e-34 149.4 143 57.3
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 2.5e-34 149.4 135 61.5
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 3.3e-34 149.1 165 51.5
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 3.3e-34 149.1 143 57.3
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 4.3e-34 148.7 110 67.3
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 9.5e-34 147.5 174 51.7
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.2e-33 144.8 135 60.7
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.2e-33 144.8 135 60.7
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.2e-33 144.8 135 60.7
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.2e-33 144.8 135 60.7
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-32 144.1 135 60.0
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.4e-32 143.7 135 60.7
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.4e-32 142.9 144 54.2
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 3.1e-32 142.5 119 63.9
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 6.8e-32 141.4 141 56.0
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.0e-31 139.8 135 59.3
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.4e-31 139.0 124 61.3
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 3.8e-30 135.6 107 72.0
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.1e-29 134.0 94 69.1
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 2.4e-29 132.9 90 77.8
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 1.7e-27 126.7 112 58.9
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 5.6e-26 121.7 156 48.7
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.3e-26 121.3 135 54.8
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-25 120.2 127 58.3
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 8.1e-25 117.9 155 51.0
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.4e-24 117.1 107 53.3
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.4e-24 117.1 107 53.3
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.9e-21 106.7 136 47.1
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 3.5e-20 102.4 65 80.0
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 5.6e-18 95.1 56 83.9
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 9.9e-15 84.3 117 51.3
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 7.9e-12 74.7 94 40.4
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 1.8e-11 73.6 53 69.8


User provided reference genes

Program Settings