Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 3.7e-263 911.4 594 100.0
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 7.8e-205 717.6 596 84.6
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 2.5e-166 589.7 578 73.4
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 7.6e-160 568.2 595 64.9
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 2.2e-159 566.6 595 68.6
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.0e-152 543.5 605 55.5
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 1.1e-150 537.7 578 68.7
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 2.7e-141 506.5 595 64.7
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.4e-140 504.2 590 59.5
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.8e-140 503.8 590 65.3
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 2.6e-139 500.0 590 64.9
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 4.8e-138 495.7 593 64.2
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 4.8e-138 495.7 576 66.7
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.2e-136 491.1 624 59.5
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 1.3e-135 487.6 585 63.1
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.1e-134 484.6 595 51.4
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.2e-134 482.6 610 53.6
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 4.2e-134 482.6 574 66.4
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 8.8e-132 474.9 585 58.6
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 1.5e-131 474.2 576 55.6
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 7.5e-131 471.9 599 45.4
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 2.2e-130 470.3 579 64.9
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.2e-130 470.3 600 53.7
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.1e-129 468.0 599 55.1
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.4e-129 467.6 590 62.0
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.4e-129 467.6 612 51.8
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 3.8e-127 459.5 593 63.2
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 3.0e-124 449.9 587 49.4
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 7.5e-123 445.3 579 60.3
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.2e-122 443.7 606 52.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 6.3e-122 442.2 610 57.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 1.2e-120 438.0 586 61.4
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 3.5e-120 436.4 610 59.7
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 5.9e-120 435.6 576 58.9
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 1.7e-119 434.1 607 57.3
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.7e-119 434.1 591 52.6
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 6.5e-119 432.2 584 60.3
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 1.2e-117 427.9 577 59.1
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 1.8e-116 424.1 623 58.6
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 6.8e-116 422.2 584 55.8
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.7e-114 416.4 513 66.7
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 3.7e-114 416.4 585 55.9
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 3.5e-112 409.8 585 59.7
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 8.6e-111 405.2 599 59.3
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 8.6e-111 405.2 595 60.0
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 8.6e-111 405.2 536 56.9
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.1e-110 404.8 583 50.6
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 1.6e-109 401.0 579 60.6
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 5.7e-107 392.5 575 57.9
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 1.3e-106 391.3 524 58.6
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 2.2e-106 390.6 491 66.4
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 1.4e-105 387.9 573 52.5
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 2.4e-105 387.1 595 56.5
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 3.2e-105 386.7 599 50.8
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 3.2e-105 386.7 603 55.1
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 7.0e-105 385.6 582 56.0
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 7.0e-105 385.6 582 56.0
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 9.2e-105 385.2 582 56.7
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.2e-104 384.8 572 57.7
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 2.7e-104 383.6 583 56.6
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 2.7e-104 383.6 583 56.6
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 3.5e-104 383.3 588 57.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 3.5e-104 383.3 582 56.5
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 5.9e-104 382.5 610 51.3
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 3.9e-103 379.8 583 55.7
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 3.9e-103 379.8 578 55.9
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 2.5e-102 377.1 503 61.8
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 3.3e-102 376.7 583 56.3
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.3e-102 376.7 523 62.9
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 4.3e-102 376.3 585 56.8
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 1.6e-101 374.4 593 54.5
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.5e-99 367.9 520 54.2
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 7.5e-99 365.5 576 54.5
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 8.3e-98 362.1 359 66.3
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 9.2e-97 358.6 577 57.4
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 3.5e-96 356.7 553 49.9
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 8.6e-95 352.1 589 53.8
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.1e-94 351.7 603 47.9
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 9.5e-94 348.6 577 56.0
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.1e-93 347.4 592 55.2
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 1.2e-91 341.7 598 52.2
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.3e-86 323.2 388 58.0
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 8.4e-82 308.9 501 52.1
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 5.4e-81 306.2 369 66.4
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 8.7e-79 298.9 598 40.3
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 8.7e-79 298.9 598 40.3
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 2.4e-76 290.8 473 59.8
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.9e-73 281.2 583 44.9
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 3.2e-73 280.4 595 51.9
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 7.1e-73 279.3 597 51.3
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 6.0e-72 276.2 593 49.7
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 3.9e-71 273.5 573 51.1
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 5.1e-71 273.1 591 50.1
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 8.7e-71 272.3 586 45.6
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 9.6e-70 268.9 586 47.8
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 1.1e-68 265.4 499 47.1
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 1.7e-66 258.1 540 54.4
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 2.2e-66 257.7 522 53.1
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 1.6e-64 251.5 589 49.9
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 5.6e-62 243.0 574 41.8
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 6.2e-61 239.6 603 48.8
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 4.9e-58 229.9 570 28.6
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 3.2e-57 227.3 519 45.5
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.4e-43 180.6 313 38.0
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 1.7e-29 135.2 331 50.8
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 1.4e-28 132.1 209 53.1
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 9.4e-25 119.4 152 48.7
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 2.1e-24 118.2 158 44.9
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.0e-15 89.4 219 49.8
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 5.5e-09 67.0 48 70.8
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 1.6e-08 65.5 48 68.8
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 3.6e-08 64.3 455 36.3
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 4.4e-06 57.4 42 64.3
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 9.8e-06 56.2 42 64.3


User provided reference genes

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