Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 1.4e-104 382.9 186 100.0
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 3.9e-102 374.8 186 97.8
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 2.0e-98 362.5 186 94.1
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 1.9e-93 345.9 186 87.6
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 4.3e-93 344.7 186 86.0
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 5.6e-93 344.4 186 86.6
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 5.6e-93 344.4 186 87.1
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 9.6e-93 343.6 186 87.1
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 2.8e-92 342.0 186 84.9
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 1.1e-91 340.1 186 87.6
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 1.1e-91 340.1 186 84.9
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 1.4e-91 339.7 186 84.4
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 1.8e-91 339.3 186 84.4
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 4.0e-91 338.2 186 84.4
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 5.3e-91 337.8 186 84.9
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 5.3e-91 337.8 186 84.4
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 6.9e-91 337.4 186 83.9
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 1.2e-90 336.7 186 86.0
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 3.4e-90 335.1 186 83.9
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 9.9e-90 333.6 186 83.9
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 9.9e-90 333.6 186 82.3
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 9.9e-90 333.6 186 82.3
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 1.3e-89 333.2 186 83.3
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 1.3e-89 333.2 186 83.9
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 1.3e-89 333.2 184 84.2
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 1.7e-89 332.8 186 83.3
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.2e-89 332.4 186 82.3
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 3.8e-89 331.6 186 84.4
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 8.4e-89 330.5 186 81.7
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 8.4e-89 330.5 185 82.7
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 1.1e-88 330.1 186 82.3
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 1.4e-88 329.7 185 81.6
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.4e-88 329.7 185 82.7
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 1.9e-88 329.3 184 82.1
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 1.9e-88 329.3 185 83.2
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 1.9e-88 329.3 186 82.8
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 2.4e-88 328.9 183 83.1
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 2.4e-88 328.9 186 83.9
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 3.2e-88 328.6 186 81.7
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 3.2e-88 328.6 183 82.5
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 4.2e-88 328.2 186 81.7
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 4.2e-88 328.2 182 82.4
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 5.4e-88 327.8 181 84.0
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 5.4e-88 327.8 183 82.5
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 5.4e-88 327.8 185 82.7
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 7.1e-88 327.4 183 82.5
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 7.1e-88 327.4 183 82.5
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 7.1e-88 327.4 186 82.8
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 9.3e-88 327.0 183 82.0
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 1.2e-87 326.6 181 82.9
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.2e-87 326.6 186 83.3
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.2e-87 326.6 181 83.4
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.2e-87 326.6 186 82.3
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 1.6e-87 326.2 186 82.8
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 1.6e-87 326.2 186 83.3
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 2.1e-87 325.9 186 81.2
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 3.5e-87 325.1 182 81.9
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 3.5e-87 325.1 186 84.4
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 3.5e-87 325.1 186 81.7
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 4.6e-87 324.7 181 82.9
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 4.6e-87 324.7 184 80.4
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 4.6e-87 324.7 184 81.0
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 6.0e-87 324.3 186 82.8
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 6.0e-87 324.3 186 79.6
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 7.9e-87 323.9 182 81.9
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 7.9e-87 323.9 186 79.0
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 1.0e-86 323.6 181 81.8
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 1.0e-86 323.6 181 81.8
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 1.0e-86 323.6 181 81.8
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 1.0e-86 323.6 181 82.9
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 1.3e-86 323.2 186 82.3
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 1.3e-86 323.2 181 81.8
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 1.3e-86 323.2 186 81.7
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 1.3e-86 323.2 186 80.6
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.3e-86 323.2 181 82.3
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 1.3e-86 323.2 182 81.3
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.3e-86 323.2 186 80.1
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 1.8e-86 322.8 186 80.6
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 3.0e-86 322.0 181 82.3
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 3.0e-86 322.0 181 81.2
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 5.1e-86 321.2 186 79.6
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 5.1e-86 321.2 184 79.9
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 5.1e-86 321.2 184 81.0
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 6.7e-86 320.9 186 79.6
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 6.7e-86 320.9 184 81.0
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 8.7e-86 320.5 184 80.4
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 8.7e-86 320.5 184 80.4
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 8.7e-86 320.5 184 80.4
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 1.1e-85 320.1 181 80.7
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 1.1e-85 320.1 181 81.2
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 1.1e-85 320.1 181 81.2
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 1.5e-85 319.7 184 78.8
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.9e-85 319.3 184 80.4
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 2.5e-85 318.9 182 80.2
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 2.5e-85 318.9 180 80.6
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 2.5e-85 318.9 180 80.6
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 2.5e-85 318.9 186 82.3
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 3.3e-85 318.5 186 79.0
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 4.3e-85 318.2 184 78.3
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 7.4e-85 317.4 178 83.1
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 9.6e-85 317.0 174 85.1
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.1e-84 315.8 184 78.8
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 2.8e-84 315.5 185 79.5
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 2.8e-84 315.5 186 76.3
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 4.8e-84 314.7 184 79.9
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 6.2e-84 314.3 172 85.5
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 8.1e-84 313.9 186 79.0
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.8e-83 312.8 186 81.2
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 2.4e-83 312.4 186 80.6
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 3.1e-83 312.0 186 80.6
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 5.3e-83 311.2 186 80.1
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 9.0e-83 310.5 186 80.1
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 2.0e-82 309.3 186 79.0
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 2.6e-82 308.9 185 75.7
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 1.8e-78 296.2 181 75.7
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 1.1e-77 293.5 181 75.1
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 8.2e-76 287.3 186 71.5
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 1.1e-75 287.0 184 71.7
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 3.1e-75 285.4 173 75.7
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 3.0e-70 268.9 186 66.1
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 3.3e-61 238.8 183 54.6
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 2.5e-56 222.6 181 54.1
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 3.2e-56 222.2 189 55.6
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 3.2e-56 222.2 183 53.0
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 2.1e-55 219.5 172 63.4
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 1.7e-52 209.9 180 52.8
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.2e-52 209.5 185 49.7
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 6.7e-46 188.0 151 57.6
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 5.0e-41 171.8 180 49.4
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 8.3e-36 154.5 89 80.9
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 5.3e-35 151.8 194 45.4
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 2.0e-26 123.2 90 65.6
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 2.3e-22 109.8 157 33.8
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 8.3e-20 101.3 54 81.5
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 2.8e-07 59.7 88 36.4


User provided reference genes

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