Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 1.2e-35 152.5 72 100.0
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 1.0e-26 122.9 85 72.9
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 3.0e-26 121.3 85 71.8
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 5.1e-26 120.6 85 70.6
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 8.7e-26 119.8 85 70.6
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 1.1e-25 119.4 85 71.8
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 1.5e-25 119.0 85 70.6
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 5.7e-25 117.1 85 69.4
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 7.4e-25 116.7 86 70.9
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 1.6e-24 115.5 85 68.2
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 1.6e-24 115.5 86 69.8
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 1.6e-24 115.5 86 69.8
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 1.6e-24 115.5 84 70.2
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 2.8e-24 114.8 84 69.0
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 3.7e-24 114.4 79 73.4
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 4.8e-24 114.0 86 69.8
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 6.2e-24 113.6 85 65.9
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 6.2e-24 113.6 85 65.9
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 8.2e-24 113.2 79 72.2
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 8.2e-24 113.2 84 66.7
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 1.4e-23 112.5 85 68.2
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 1.8e-23 112.1 82 70.7
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 2.4e-23 111.7 85 65.9
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 5.3e-23 110.5 70 71.4
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 6.9e-23 110.2 84 64.3
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 1.2e-22 109.4 85 64.7
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 2.0e-22 108.6 80 68.8
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.0e-22 108.6 80 68.8
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.6e-22 108.2 80 68.8
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.6e-22 108.2 80 68.8
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 3.4e-22 107.8 79 68.4
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 1.0e-21 106.3 94 60.6
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 1.0e-21 106.3 85 63.5
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 1.0e-21 106.3 57 80.7
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 1.3e-21 105.9 94 60.6
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 1.3e-21 105.9 81 67.9
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 1.7e-21 105.5 85 61.2
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 1.7e-21 105.5 83 63.9
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 2.9e-21 104.8 76 67.1
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 3.8e-21 104.4 84 60.7
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 8.4e-21 103.2 85 61.2
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.1e-20 102.8 83 60.2
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.1e-20 102.8 83 60.2
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 1.4e-20 102.4 85 64.7
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.9e-20 102.1 80 61.2
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 2.5e-20 101.7 83 60.2
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 2.5e-20 101.7 85 62.4
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 3.2e-20 101.3 83 60.2
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 3.2e-20 101.3 83 60.2
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 3.2e-20 101.3 83 59.0
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 5.5e-20 100.5 85 58.8
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 5.5e-20 100.5 73 69.9
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 5.5e-20 100.5 85 62.4
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 5.5e-20 100.5 85 62.4
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 5.5e-20 100.5 79 62.0
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 1.2e-19 99.4 80 62.5
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 1.2e-19 99.4 77 64.9
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 1.6e-19 99.0 83 60.2
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 2.1e-19 98.6 83 61.4
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 2.1e-19 98.6 84 61.9
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 2.1e-19 98.6 89 57.3
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 2.1e-19 98.6 89 57.3
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 2.1e-19 98.6 79 64.6
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 2.7e-19 98.2 84 54.8
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 2.7e-19 98.2 85 60.0
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 2.7e-19 98.2 83 60.2
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 2.7e-19 98.2 80 58.8
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 3.5e-19 97.8 85 62.4
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 4.6e-19 97.4 85 61.2
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 4.6e-19 97.4 86 62.8
Rhsim13G0075400 Rhododendron simsii HOM05D004551 ORTHO05D005262 4.6e-19 97.4 55 80.0
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 4.6e-19 97.4 79 63.3
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 4.6e-19 97.4 79 63.3
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 6.1e-19 97.1 80 61.2
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 7.9e-19 96.7 84 57.1
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 1.3e-18 95.9 86 62.8
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 2.3e-18 95.1 87 56.3
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 3.0e-18 94.7 84 60.7
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 3.0e-18 94.7 82 61.0
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 3.0e-18 94.7 82 61.0
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 3.0e-18 94.7 82 61.0
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 3.0e-18 94.7 79 59.5
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 3.9e-18 94.4 82 57.3
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 6.7e-18 93.6 82 57.3
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 8.7e-18 93.2 85 60.0
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 1.1e-17 92.8 79 58.2
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 1.1e-17 92.8 59 74.6
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 1.1e-17 92.8 84 58.3
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 1.1e-17 92.8 79 60.8
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 1.5e-17 92.4 79 58.2
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 1.5e-17 92.4 91 51.6
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 1.5e-17 92.4 84 58.3
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 1.5e-17 92.4 68 67.6
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 1.5e-17 92.4 82 58.5
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 1.9e-17 92.0 79 58.2
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 1.9e-17 92.0 77 58.4
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 1.9e-17 92.0 79 58.2
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 2.5e-17 91.7 70 61.4
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 2.5e-17 91.7 85 58.8
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 3.3e-17 91.3 86 54.7
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 4.3e-17 90.9 81 55.6
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 5.7e-17 90.5 87 54.0
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 9.7e-17 89.7 70 67.1
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 9.7e-17 89.7 70 67.1
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 1.3e-16 89.4 77 55.8
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 1.3e-16 89.4 97 50.5
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 1.6e-16 89.0 85 56.5
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 1.6e-16 89.0 90 55.6
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 1.6e-16 89.0 86 52.3
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 2.2e-16 88.6 84 58.3
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 2.2e-16 88.6 68 66.2
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 3.7e-16 87.8 72 56.9
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 4.8e-16 87.4 85 55.3
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 6.3e-16 87.0 87 51.7
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 8.2e-16 86.7 68 63.2
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 1.1e-15 86.3 83 53.0
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 1.1e-15 86.3 68 63.2
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 1.4e-15 85.9 77 57.1
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 1.4e-15 85.9 63 66.7
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 1.8e-15 85.5 94 50.0
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 2.4e-15 85.1 76 53.9
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 3.1e-15 84.7 68 66.2
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 4.1e-15 84.3 68 63.2
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 6.9e-15 83.6 84 56.0
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 6.9e-15 83.6 71 56.3
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 9.0e-15 83.2 111 42.3
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 2.6e-14 81.6 79 51.9
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 2.6e-14 81.6 72 56.9
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 5.9e-14 80.5 40 85.0
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 5.9e-14 80.5 40 85.0
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 1.0e-13 79.7 87 48.3
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 1.3e-13 79.3 83 49.4
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 1.7e-13 79.0 59 64.4
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 1.7e-13 79.0 55 69.1
TPR.G13621 Trifolium pratense HOM05D004551 ORTHO05D005262 1.7e-13 79.0 40 85.0
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 1.7e-13 79.0 40 82.5
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 6.5e-13 77.0 68 60.3
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 8.5e-13 76.6 83 50.6
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 8.5e-13 76.6 71 47.9
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 3.2e-12 74.7 98 46.9
MD02G1278800 Malus domestica HOM05D004551 ORTHO05D005262 5.5e-12 73.9 46 71.7
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 1.6e-11 72.4 39 74.4
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 2.7e-11 71.6 69 44.9
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 6.1e-11 70.5 67 55.2
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 1.8e-10 68.9 86 46.5
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 1.8e-10 68.9 87 48.3
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 2.3e-10 68.6 71 52.1
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 4.3e-09 64.3 101 40.6
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 5.7e-09 63.9 52 63.5
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 9.7e-09 63.2 64 46.9
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 1.3e-08 62.8 37 67.6
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 1.4e-07 59.3 77 42.9
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 2.4e-07 58.5 52 59.6
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 5.3e-07 57.4 55 54.5


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