Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 2.4e-77 292.4 177 100.0
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 4.6e-68 261.5 180 92.8
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 3.8e-30 135.6 183 57.9
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 3.8e-30 135.6 172 57.6
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 3.2e-29 132.5 142 65.5
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 6.0e-28 128.3 180 50.0
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 1.0e-27 127.5 180 48.9
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.1e-26 124.0 170 55.3
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 4.3e-26 122.1 169 55.0
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 8.1e-25 117.9 188 50.5
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 5.5e-21 105.1 179 43.6
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 3.9e-19 99.0 149 43.0
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 3.9e-19 99.0 178 48.3
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 4.3e-18 95.5 168 43.5
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 5.7e-18 95.1 159 44.0
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 5.7e-18 95.1 186 46.8
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 2.1e-17 93.2 179 39.7
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 4.8e-17 92.0 101 55.4
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.1e-16 90.9 147 53.1
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.1e-16 90.9 169 42.0
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.4e-16 90.5 106 51.9
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.8e-16 90.1 160 46.9
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.8e-16 90.1 160 46.9
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.8e-16 90.1 160 46.9
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 2.4e-16 89.7 178 43.3
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 6.9e-16 88.2 168 39.3
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 6.9e-16 88.2 154 39.6
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 9.0e-16 87.8 169 41.4
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 3.4e-15 85.9 176 45.5
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 4.5e-15 85.5 167 46.7
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 4.5e-15 85.5 126 42.9
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 4.5e-15 85.5 178 37.1
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 5.8e-15 85.1 163 42.3
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 5.8e-15 85.1 106 45.3
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 7.6e-15 84.7 164 42.1
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.0e-14 84.3 195 37.9
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 1.0e-14 84.3 167 40.1
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 1.3e-14 84.0 178 41.6
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 2.9e-14 82.8 165 41.8
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 5.0e-14 82.0 170 37.6
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 5.0e-14 82.0 181 39.8
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 5.0e-14 82.0 181 39.8
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 6.5e-14 81.6 169 40.8
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 6.5e-14 81.6 165 42.4
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 8.4e-14 81.3 181 40.3
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.1e-13 80.9 160 48.8
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.1e-13 80.9 164 42.1
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.1e-13 80.9 167 41.9
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.1e-13 80.9 146 40.4
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.4e-13 80.5 106 45.3
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.4e-13 80.5 114 55.3
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.9e-13 80.1 166 43.4
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.2e-13 79.3 179 38.5
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 4.2e-13 79.0 95 51.6
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 5.5e-13 78.6 170 43.5
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 5.5e-13 78.6 179 38.5
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 5.5e-13 78.6 179 40.2
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 9.3e-13 77.8 101 51.5
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 1.2e-12 77.4 101 44.6
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.2e-12 77.4 99 60.6
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.2e-12 77.4 104 39.4
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.2e-12 77.4 182 44.0
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.2e-12 77.4 100 51.0
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.2e-12 77.4 172 38.4
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 1.2e-12 77.4 179 39.1
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.6e-12 77.0 163 41.1
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 2.1e-12 76.6 78 50.0
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 2.1e-12 76.6 155 34.8
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 2.1e-12 76.6 171 42.1
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.5e-12 75.9 170 38.8
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 6.1e-12 75.1 106 38.7
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.0e-11 74.3 106 38.7
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.0e-11 74.3 106 38.7
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.0e-11 74.3 180 39.4
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 1.3e-11 73.9 106 45.3
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.8e-11 73.6 159 43.4
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 1.8e-11 73.6 163 37.4
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 2.3e-11 73.2 181 41.4
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 3.0e-11 72.8 185 41.1
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 3.0e-11 72.8 132 42.4
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 6.7e-11 71.6 75 50.7
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.5e-10 70.5 79 48.1
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 1.5e-10 70.5 80 48.8
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.5e-10 70.5 79 48.1
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.5e-10 70.5 79 48.1
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 2.5e-10 69.7 80 47.5
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 3.3e-10 69.3 173 35.8
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 3.3e-10 69.3 157 38.9
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 3.3e-10 69.3 70 51.4
Ca_01307_v3 Cicer arietinum L. HOM05D007264 ORTHO05D008639 4.3e-10 68.9 122 49.2
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 5.7e-10 68.6 106 37.7
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.7e-09 65.9 147 40.1
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 6.3e-09 65.1 73 52.1
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 4.1e-08 62.4 175 42.3
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 6.9e-08 61.6 178 38.8
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 9.0e-08 61.2 170 31.8
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 5.9e-07 58.5 67 53.7
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 1.3e-06 57.4 189 30.7
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 1.7e-06 57.0 55 58.2
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 1.7e-06 57.0 55 58.2
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 1.7e-06 57.0 55 58.2
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 5.0e-06 55.5 75 41.3


User provided reference genes

Program Settings