Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L007143 Phaseolus vulgaris HOM05D016115 ORTHO05D004331 5.6e-33 143.7 71 100.0
Lalb_Chr14g0375161 Lupinus albus HOM05D004372 ORTHO05D004331 2.3e-15 85.1 59 71.2
Ca_01314_v3 Cicer arietinum L. HOM05D016115 ORTHO05D004331 1.3e-13 79.3 63 69.8
Medtr5g043320 Medicago truncatula HOM05D016115 ORTHO05D004331 1.6e-11 72.4 79 55.7
arahy.Tifrunner.gnm1.ann1.JA3FRH Arachis hypogaea HOM05D016115 ORTHO05D004331 6.0e-11 70.5 72 56.9
Lj3g0010706 Lotus japonicus HOM05D004372 ORTHO05D004331 1.7e-10 68.9 68 55.9
QL01p030934 Quercus lobata HOM05D004372 ORTHO05D004331 2.3e-10 68.6 51 54.9
Lj3g0018051 Lotus japonicus HOM05D016115 ORTHO05D004331 3.9e-10 67.8 64 57.8
TPR.G31830 Trifolium pratense HOM05D016115 ORTHO05D004331 5.1e-10 67.4 78 60.3
COL.COLO4_18555 Corchorus olitorius HOM05D004372 ORTHO05D004331 6.6e-10 67.0 51 72.5
Thecc.09G318100 Theobroma cacao HOM05D004372 ORTHO05D004331 1.9e-09 65.5 51 62.7
ClCG10G021220 Citrullus lanatus HOM05D004372 ORTHO05D004331 4.3e-09 64.3 59 49.2
Sed0010480 Sechium edule HOM05D004372 ORTHO05D004331 9.5e-09 63.2 56 64.3
CsaV3_3G034820 Cucumis sativus L. HOM05D004372 ORTHO05D004331 1.2e-08 62.8 51 60.8
Duzib150G1613 Durio zibethinus HOM05D004372 ORTHO05D004331 1.2e-08 62.8 52 57.7
Cpa.g.sc81.114 Carica papaya HOM05D004372 ORTHO05D004331 1.6e-08 62.4 54 55.6
Gohir.A05G094000 Gossypium hirsutum HOM05D004372 ORTHO05D004331 1.6e-08 62.4 51 56.9
Medtr5g086390 Medicago truncatula HOM05D016115 ORTHO05D004331 2.1e-08 62.0 75 54.7
Sp1g06230 Schrenkiella parvula HOM05D004372 ORTHO05D004331 2.1e-08 62.0 53 54.7
arahy.Tifrunner.gnm1.ann1.FU8KT7 Arachis hypogaea HOM05D016115 ORTHO05D004331 2.8e-08 61.6 54 63.0
Gorai.009G097700 Gossypium raimondii HOM05D004372 ORTHO05D004331 2.8e-08 61.6 52 69.2
Oeu026714.1 Olea europaea HOM05D004372 ORTHO05D004331 3.6e-08 61.2 52 53.8
Gohir.D05G094500 Gossypium hirsutum HOM05D004372 ORTHO05D004331 4.7e-08 60.8 52 67.3
QL07p048809 Quercus lobata HOM05D004372 ORTHO05D004331 6.2e-08 60.5 60 56.7
CANSAT11G2039 Cannabis sativa HOM05D004372 ORTHO05D004331 1.1e-07 59.7 55 56.4
Carub.0001s0682 Capsella rubella HOM05D004372 ORTHO05D004331 1.4e-07 59.3 57 49.1
Ciclev10029728m.g Citrus clementina HOM05D004372 ORTHO05D004331 1.4e-07 59.3 61 49.2
BcaB02g06736 Brassica carinata HOM05D004372 ORTHO05D004331 1.8e-07 58.9 63 44.4
A08p35620 Brassica napus HOM05D004372 ORTHO05D004331 4.0e-07 57.8 60 45.0
BraA08t35468Z Brassica rapa HOM05D004372 ORTHO05D004331 4.0e-07 57.8 60 45.0
MELO3C009251.2 Cucumis melo HOM05D004372 ORTHO05D004331 4.0e-07 57.8 51 58.8
FAN02G2532 Fragaria x ananassa HOM05D004372 ORTHO05D004331 4.0e-07 57.8 51 51.0
FvH4_6g13440 Fragaria vesca HOM05D004372 ORTHO05D004331 5.2e-07 57.4 51 51.0
FAN09G4335 Fragaria x ananassa HOM05D004372 ORTHO05D004331 5.2e-07 57.4 51 51.0
FAN14G0518 Fragaria x ananassa HOM05D004372 ORTHO05D004331 5.2e-07 57.4 51 51.0
arahy.Tifrunner.gnm1.ann1.62QC1P Arachis hypogaea HOM05D016115 ORTHO05D004331 6.8e-07 57.0 58 56.9
Cpa.g.c34680 Carica papaya HOM05D004372 ORTHO05D004331 6.8e-07 57.0 61 42.6
Zm00001eb148250 Zea mays HOM05D004372 ORTHO05D004331 6.8e-07 57.0 60 46.7
AL1G17680 Arabidopsis lyrata HOM05D004372 ORTHO05D004331 8.9e-07 56.6 61 45.9
MELO3C023871.2 Cucumis melo HOM05D004372 ORTHO05D004331 2.0e-06 55.5 61 49.2
Hma1.2p1_0936F.1_g238880 Hydrangea macrophylla HOM05D004372 ORTHO05D004331 2.0e-06 55.5 56 50.0
Nn2g11160 Nelumbo nucifera HOM05D004372 ORTHO05D004331 2.0e-06 55.5 51 49.0
MD11G1097200 Malus domestica HOM05D004372 ORTHO05D004331 2.6e-06 55.1 59 45.8
Nn2g13398 Nelumbo nucifera HOM05D004372 ORTHO05D004331 2.6e-06 55.1 51 49.0
Prupe.6G072300 Prunus persica HOM05D004372 ORTHO05D004331 2.6e-06 55.1 62 43.5
MD03G1088000 Malus domestica HOM05D004372 ORTHO05D004331 3.4e-06 54.7 63 44.4
Haze_20817 Corylus avellana HOM05D004372 ORTHO05D004331 4.4e-06 54.3 62 46.8
Os01g0843700 Oryza sativa ssp. japonica HOM05D004372 ORTHO05D004331 4.4e-06 54.3 53 49.1
TAR633G2336 Trochodendron aralioides HOM05D004372 ORTHO05D004331 4.4e-06 54.3 51 47.1
A10p06030 Brassica napus HOM05D004372 ORTHO05D004331 5.8e-06 53.9 58 44.8
BraA10t42865Z Brassica rapa HOM05D004372 ORTHO05D004331 5.8e-06 53.9 58 44.8
CiPaw.15G088800 Carya illinoinensis HOM05D004372 ORTHO05D004331 5.8e-06 53.9 55 58.2
Cfa001453 Carpinus fangiana HOM05D004372 ORTHO05D004331 7.6e-06 53.5 52 48.1
Lsat_1_v5_gn_8_15240 Lactuca sativa HOM05D004372 ORTHO05D004331 7.6e-06 53.5 62 40.3
MD04G1131100 Malus domestica HOM05D004372 ORTHO05D004331 7.6e-06 53.5 51 52.9
RcHm_v2.0_Chr3g0466321 Rosa chinensis HOM05D004372 ORTHO05D004331 7.6e-06 53.5 51 47.1
TAR623G0224 Trochodendron aralioides HOM05D004372 ORTHO05D004331 7.6e-06 53.5 46 52.2
CiPaw.13G091200 Carya illinoinensis HOM05D004372 ORTHO05D004331 9.9e-06 53.1 56 57.1
ClCG07G003460 Citrullus lanatus HOM05D004372 ORTHO05D004331 9.9e-06 53.1 61 47.5
Glyma.02G248800 Glycine max HOM05D004372 ORTHO05D004331 9.9e-06 53.1 65 43.1


User provided reference genes

Program Settings