Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 2.2e-64 248.8 127 100.0
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 4.4e-57 224.6 127 90.6
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 3.2e-47 191.8 129 79.8
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 6.2e-43 177.6 129 75.2
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 2.1e-35 152.5 135 66.7
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 9.3e-31 137.1 134 58.2
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 1.0e-29 133.7 133 63.2
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 1.3e-29 133.3 134 62.7
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 8.2e-27 124.0 83 74.7
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 9.0e-26 120.6 115 61.7
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 2.6e-25 119.0 134 53.0
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.6e-25 119.0 131 57.3
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 2.2e-24 115.9 83 65.1
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 4.9e-24 114.8 88 64.8
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 6.5e-24 114.4 79 67.1
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 8.4e-24 114.0 90 61.1
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 1.1e-23 113.6 83 66.3
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.9e-23 112.8 83 66.3
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 1.9e-23 112.8 88 61.4
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 3.2e-23 112.1 84 64.3
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 4.2e-23 111.7 120 53.3
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 4.2e-23 111.7 120 53.3
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 5.5e-23 111.3 83 63.9
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 5.5e-23 111.3 78 65.4
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 9.3e-23 110.5 86 64.0
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 9.3e-23 110.5 84 63.1
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 1.2e-22 110.2 166 44.6
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 1.2e-22 110.2 98 56.1
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.2e-22 110.2 81 65.4
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 1.2e-22 110.2 87 64.4
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 1.2e-22 110.2 80 66.2
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.6e-22 109.8 83 67.5
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.1e-22 109.4 75 70.7
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.1e-22 109.4 87 63.2
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 2.1e-22 109.4 83 66.3
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 2.7e-22 109.0 87 63.2
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.7e-22 109.0 87 63.2
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.7e-22 109.0 87 63.2
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.7e-22 109.0 87 63.2
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 2.7e-22 109.0 89 64.0
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.7e-22 109.0 78 66.7
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.5e-22 108.6 130 53.1
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 4.6e-22 108.2 74 74.3
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 6.0e-22 107.8 78 62.8
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.0e-21 107.1 79 67.1
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 1.0e-21 107.1 79 64.6
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.3e-21 106.7 94 59.6
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 1.8e-21 106.3 93 58.1
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 1.8e-21 106.3 106 55.7
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 2.3e-21 105.9 84 63.1
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.3e-21 105.9 94 59.6
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 2.3e-21 105.9 108 53.7
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 3.0e-21 105.5 85 63.5
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.0e-21 105.5 84 59.5
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 3.0e-21 105.5 79 64.6
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 3.9e-21 105.1 117 47.9
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 6.7e-21 104.4 68 70.6
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 8.7e-21 104.0 79 65.8
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.1e-20 103.6 85 62.4
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 1.1e-20 103.6 80 67.5
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 1.9e-20 102.8 79 67.1
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.9e-20 102.8 78 66.7
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 1.9e-20 102.8 78 66.7
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.9e-20 102.8 73 69.9
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.3e-20 102.1 78 65.4
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 5.7e-20 101.3 79 65.8
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 5.7e-20 101.3 79 65.8
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 5.7e-20 101.3 79 65.8
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 5.7e-20 101.3 86 60.5
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 5.7e-20 101.3 92 62.0
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 7.4e-20 100.9 77 67.5
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 7.4e-20 100.9 75 68.0
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 9.7e-20 100.5 108 52.8
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 9.7e-20 100.5 123 48.0
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.3e-19 100.1 75 66.7
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 2.2e-19 99.4 79 64.6
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 2.2e-19 99.4 75 66.7
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 2.2e-19 99.4 75 66.7
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 2.2e-19 99.4 79 65.8
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 2.2e-19 99.4 83 65.1
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 2.2e-19 99.4 81 63.0
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 2.2e-19 99.4 79 60.8
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 2.8e-19 99.0 79 64.6
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 2.8e-19 99.0 75 66.7
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 4.8e-19 98.2 76 65.8
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 4.8e-19 98.2 76 65.8
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 4.8e-19 98.2 76 65.8
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 6.3e-19 97.8 76 64.5
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 8.2e-19 97.4 72 66.7
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 1.1e-18 97.1 77 58.4
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.4e-18 96.7 84 59.5
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 1.4e-18 96.7 79 65.8
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 3.1e-18 95.5 76 64.5
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 3.1e-18 95.5 78 57.7
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 4.1e-18 95.1 76 64.5
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 6.9e-18 94.4 80 57.5
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 9.0e-18 94.0 86 59.3
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 9.0e-18 94.0 78 61.5
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 2.0e-17 92.8 116 48.3
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 2.0e-17 92.8 71 63.4
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 2.6e-17 92.4 89 55.1
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 2.6e-17 92.4 118 45.8
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 5.9e-17 91.3 87 55.2
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 7.6e-17 90.9 79 58.2
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 3.8e-16 88.6 77 58.4
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 6.5e-16 87.8 112 48.2
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-15 85.5 63 71.4
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-15 85.5 63 71.4
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.1e-14 82.8 60 75.0
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 1.4e-13 80.1 60 66.7
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.4e-13 80.1 61 63.9
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 6.7e-13 77.8 62 66.1
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 9.7e-12 73.9 80 46.2
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 5.3e-10 68.2 50 58.0
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 5.9e-09 64.7 52 71.2
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.3e-08 63.5 58 58.6
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 8.5e-08 60.8 43 58.1


User provided reference genes

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