Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 3.2e-67 258.5 148 100.0
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.1e-64 250.0 149 97.3
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 5.0e-60 234.6 153 90.8
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 6.5e-60 234.2 153 88.9
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 5.9e-53 211.1 161 72.7
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.0e-52 210.3 169 76.3
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 4.7e-50 201.4 170 68.2
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 3.4e-48 195.3 151 76.8
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 5.4e-46 188.0 167 68.9
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 3.3e-43 178.7 156 65.4
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.6e-42 176.4 156 64.1
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 2.1e-42 176.0 155 63.2
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 4.7e-42 174.9 141 66.7
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 6.1e-42 174.5 145 64.8
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 1.0e-41 173.7 160 66.2
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 1.4e-41 173.3 145 64.8
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 1.8e-41 172.9 157 60.5
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 1.8e-41 172.9 157 60.5
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 3.0e-41 172.2 145 63.4
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 8.9e-41 170.6 141 66.0
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.2e-40 170.2 155 60.6
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 1.5e-40 169.9 147 63.9
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.6e-40 169.1 145 62.8
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 2.6e-40 169.1 141 70.2
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 5.7e-40 167.9 142 64.8
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 7.5e-40 167.5 146 61.6
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 7.5e-40 167.5 150 67.3
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 7.5e-40 167.5 153 62.7
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.7e-39 166.4 149 63.1
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 2.8e-39 165.6 148 62.8
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 3.7e-39 165.2 151 63.6
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 8.3e-39 164.1 149 62.4
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.4e-38 163.3 145 62.1
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.4e-38 163.3 141 67.4
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 2.4e-38 162.5 138 64.5
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 2.4e-38 162.5 141 63.8
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 2.4e-38 162.5 144 66.7
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.1e-38 161.8 144 61.8
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 4.1e-38 161.8 155 61.3
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 5.4e-38 161.4 141 61.0
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 7.0e-38 161.0 138 63.0
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.2e-37 160.2 142 61.3
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 1.2e-37 160.2 151 60.9
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.6e-37 159.8 160 60.6
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 3.5e-37 158.7 149 59.1
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 5.9e-37 157.9 152 62.5
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 1.0e-36 157.1 135 63.0
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 2.9e-36 155.6 140 61.4
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 5.0e-36 154.8 136 64.7
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 6.6e-36 154.5 141 60.3
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 8.6e-36 154.1 133 63.2
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.5e-35 153.3 152 57.9
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 3.3e-35 152.1 155 56.1
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 4.3e-35 151.8 161 55.9
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 5.6e-35 151.4 143 61.5
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 7.3e-35 151.0 163 57.7
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.6e-34 149.8 140 58.6
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.6e-34 149.8 158 56.3
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.6e-34 149.8 133 60.9
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 1.6e-34 149.8 152 58.6
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 1.6e-34 149.8 146 57.5
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 1.6e-34 149.8 146 57.5
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 2.1e-34 149.4 140 57.9
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 2.1e-34 149.4 146 56.8
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 4.7e-34 148.3 147 59.2
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.0e-33 147.1 147 56.5
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.0e-33 147.1 147 56.5
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 1.8e-33 146.4 142 56.3
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 4.0e-33 145.2 164 58.5
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.5e-32 143.3 140 57.9
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-32 143.3 164 53.7
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 2.6e-32 142.5 165 53.3
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.6e-32 142.5 165 53.3
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 4.4e-32 141.7 90 77.8
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 5.8e-32 141.4 152 55.9
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 5.8e-32 141.4 142 56.3
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.2e-31 139.4 164 57.3
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 2.9e-31 139.0 162 55.6
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 2.9e-31 139.0 167 49.1
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 3.7e-31 138.7 140 56.4
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 3.7e-31 138.7 143 55.2
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 3.7e-31 138.7 140 56.4
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 4.9e-31 138.3 142 55.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 4.9e-31 138.3 142 55.6
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 4.9e-31 138.3 157 60.5
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 6.4e-31 137.9 142 56.3
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 6.4e-31 137.9 142 56.3
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 1.1e-30 137.1 158 51.9
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 4.1e-30 135.2 94 69.1
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 7.0e-30 134.4 145 64.1
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 9.2e-30 134.0 140 57.1
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 2.0e-29 132.9 159 54.1
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.3e-28 130.2 146 54.8
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 2.3e-28 129.4 95 69.5
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 8.6e-28 127.5 141 51.1
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 3.3e-27 125.6 139 61.2
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 8.0e-26 120.9 177 42.4
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 1.8e-25 119.8 145 53.1
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 2.3e-25 119.4 157 45.9
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 6.8e-25 117.9 179 42.5
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 8.9e-25 117.5 146 50.7
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 5.8e-24 114.8 130 51.5
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.9e-23 112.5 97 62.9
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 3.7e-23 112.1 80 71.2
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 2.4e-22 109.4 148 45.9
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 2.4e-22 109.4 105 60.0
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.1e-19 100.5 90 61.1
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.5e-19 100.1 85 61.2
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 2.5e-19 99.4 60 86.7
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 3.3e-19 99.0 132 45.5
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 4.3e-19 98.6 120 59.2
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 9.5e-19 97.4 137 45.3
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.1e-18 96.3 152 42.1
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.7e-18 95.1 148 41.2
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.4e-17 93.6 146 41.8
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.8e-17 93.2 146 41.8
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.8e-17 93.2 148 41.9
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 2.3e-17 92.8 104 51.9
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 2.2e-15 86.3 95 48.4
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 4.1e-14 82.0 134 41.8
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 2.3e-12 76.3 93 50.5
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.5e-11 70.9 110 42.7
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 2.8e-10 69.3 132 34.1
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 2.6e-08 62.8 67 55.2
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 3.8e-07 58.9 104 43.3
BcaB04g19283 Brassica carinata HOM05D006168 ORTHO05D007602 5.4e-06 55.1 67 49.3


User provided reference genes

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