Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 1.3e-92 343.2 186 100.0
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 5.0e-57 224.9 180 71.7
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 2.2e-44 183.0 179 64.8
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 1.8e-38 163.3 177 60.5
VMungo0251G0728 Vigna mungo HOM05D005967 ORTHO05D005174 3.0e-30 136.0 142 57.0
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 8.0e-23 111.3 93 61.3
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.1e-14 82.8 160 40.0
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.2e-14 82.0 161 37.3
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 5.2e-14 82.0 184 33.2
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 5.2e-14 82.0 172 32.0
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.0e-13 80.1 87 47.1
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.6e-13 79.7 80 46.2
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 3.4e-13 79.3 170 33.5
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.4e-13 79.0 168 33.9
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 4.9e-12 75.5 167 29.9
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.4e-11 73.9 170 34.7
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.9e-11 73.6 170 35.3
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 3.2e-11 72.8 71 49.3
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.1e-11 72.4 77 46.8
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.2e-10 70.9 75 46.7
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.2e-10 70.9 72 43.1
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 1.6e-10 70.5 104 38.5
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 3.5e-10 69.3 76 47.4
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.6e-10 68.9 88 42.0
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 6.0e-10 68.6 79 40.5
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 1.0e-09 67.8 75 46.7
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 1.3e-09 67.4 99 43.4
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 1.7e-09 67.0 72 48.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 1.7e-09 67.0 76 47.4
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.3e-09 66.6 171 33.9
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 3.9e-09 65.9 178 28.1
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.9e-09 65.9 81 45.7
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.0e-09 65.5 79 46.8
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 6.6e-09 65.1 153 33.3
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 8.6e-09 64.7 187 35.3
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 8.6e-09 64.7 171 33.3
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 8.6e-09 64.7 171 33.3
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 8.6e-09 64.7 87 41.4
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.5e-08 63.9 69 46.4
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.9e-08 63.5 165 29.7
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.5e-08 63.2 171 32.7
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 4.3e-08 62.4 79 40.5
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 5.6e-08 62.0 135 31.1
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 9.5e-08 61.2 98 35.7
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 9.5e-08 61.2 59 47.5
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 1.2e-07 60.8 73 46.6
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.2e-07 60.8 66 50.0
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.6e-07 60.5 91 44.0
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.6e-07 60.5 91 44.0
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.6e-07 60.5 91 44.0
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.1e-07 60.1 171 32.2
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.8e-07 59.7 77 37.7
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.6e-07 59.3 61 45.9
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 3.6e-07 59.3 68 42.6
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 4.7e-07 58.9 84 35.7
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 4.7e-07 58.9 77 42.9
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 4.7e-07 58.9 93 39.8
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.2e-07 58.5 85 41.2
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 6.2e-07 58.5 104 35.6
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 6.2e-07 58.5 88 38.6
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-06 57.8 93 37.6
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 1.1e-06 57.8 134 27.6
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.4e-06 57.4 61 47.5
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.8e-06 57.0 84 41.7
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 2.3e-06 56.6 96 36.5
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 2.3e-06 56.6 67 46.3
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 3.1e-06 56.2 66 42.4
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 3.1e-06 56.2 89 39.3
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 3.1e-06 56.2 94 38.3
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 4.0e-06 55.8 65 47.7
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 4.0e-06 55.8 70 48.6
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 4.0e-06 55.8 72 37.5
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 4.0e-06 55.8 95 34.7
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 5.2e-06 55.5 58 48.3
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 6.8e-06 55.1 89 37.1
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 6.8e-06 55.1 64 51.6
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 6.8e-06 55.1 58 46.6
Psat7g217000 Pisum sativum HOM05D005967 ORTHO05D005174 8.9e-06 54.7 147 30.6


User provided reference genes

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