Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L003146 Phaseolus vulgaris HOM05D005578 ORTHO05D006969 7.9e-106 387.1 194 100.0
Phvul.005G177500 Phaseolus vulgaris HOM05D005578 ORTHO05D006969 3.7e-79 298.5 183 85.2
Glyma.13G365067 Glycine max HOM05D005578 ORTHO05D006969 1.6e-74 283.1 180 81.7
VMungo1080G0492 Vigna mungo HOM05D005578 ORTHO05D006969 9.7e-72 273.9 181 79.6
Glyma.15G008200 Glycine max HOM05D005578 ORTHO05D006969 2.2e-71 272.7 185 78.4
Medtr1g008370 Medicago truncatula HOM05D005578 ORTHO05D006969 3.6e-66 255.4 180 73.3
TPR.G12104 Trifolium pratense HOM05D005578 ORTHO05D006969 3.6e-66 255.4 185 71.9
Psat6g034120 Pisum sativum HOM05D005578 ORTHO05D006969 1.4e-65 253.4 180 73.3
Ca_12803_v3 Cicer arietinum L. HOM05D005578 ORTHO05D006969 5.2e-65 251.5 180 73.9
Ca_12815_v3 Cicer arietinum L. HOM05D005578 ORTHO05D006969 5.2e-65 251.5 180 73.9
Lj2g0024445 Lotus japonicus HOM05D005578 ORTHO05D006969 2.2e-63 246.1 180 71.7
Lalb_Chr10g0096771 Lupinus albus HOM05D005578 ORTHO05D006969 8.3e-63 244.2 180 71.7
Lj1g0014139 Lotus japonicus HOM05D005578 ORTHO05D006969 1.4e-62 243.4 180 70.0
arahy.Tifrunner.gnm1.ann1.22GNET Arachis hypogaea HOM05D005578 ORTHO05D006969 1.6e-61 240.0 181 69.6
arahy.Tifrunner.gnm1.ann1.SET2JR Arachis hypogaea HOM05D005578 ORTHO05D006969 1.6e-61 240.0 181 69.6
GSVIVG01038127001 Vitis vinifera HOM05D005578 ORTHO05D006969 1.6e-58 229.9 182 67.0
Duzib084G0701 Durio zibethinus HOM05D005578 ORTHO05D006969 2.7e-58 229.2 179 66.5
Gohir.D09G171900 Gossypium hirsutum HOM05D005578 ORTHO05D006969 3.6e-58 228.8 180 65.0
Gohir.A09G176200 Gossypium hirsutum HOM05D005578 ORTHO05D006969 4.7e-58 228.4 180 64.4
Gorai.006G193800 Gossypium raimondii HOM05D005578 ORTHO05D006969 4.7e-58 228.4 180 65.0
RcHm_v2.0_Chr4g0406211 Rosa chinensis HOM05D005578 ORTHO05D006969 2.3e-57 226.1 178 65.7
FAN07G2607 Fragaria x ananassa HOM05D005578 ORTHO05D006969 3.0e-57 225.7 178 65.7
Manes.04G036900 Manihot esculenta HOM05D005578 ORTHO05D006969 3.0e-57 225.7 180 64.4
Sabra06G0097900 Salix brachista HOM05D005578 ORTHO05D006969 4.0e-57 225.3 179 64.2
Dinv33195 Davidia involucrata HOM05D005578 ORTHO05D006969 6.8e-57 224.6 180 65.0
MD04G1048400 Malus domestica HOM05D005578 ORTHO05D006969 6.8e-57 224.6 175 66.3
Potri.006G123700 Populus trichocarpa HOM05D005578 ORTHO05D006969 6.8e-57 224.6 177 65.0
Prupe.1G080200 Prunus persica HOM05D005578 ORTHO05D006969 8.8e-57 224.2 178 65.2
FAN22G0827 Fragaria x ananassa HOM05D005578 ORTHO05D006969 1.5e-56 223.4 178 64.6
Thecc.03G041600 Theobroma cacao HOM05D005578 ORTHO05D006969 1.5e-56 223.4 179 64.8
CSS0000228 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 2.0e-56 223.0 179 63.1
CSS0036062 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 2.0e-56 223.0 179 63.1
CiPaw.02G101100 Carya illinoinensis HOM05D005578 ORTHO05D006969 2.0e-56 223.0 180 65.6
Atru.chr4.1387 Acer truncatum HOM05D005578 ORTHO05D006969 2.6e-56 222.6 185 62.7
ClCG07G015240 Citrullus lanatus HOM05D005578 ORTHO05D006969 2.6e-56 222.6 174 64.9
Actinidia27108 Actinidia chinensis HOM05D005578 ORTHO05D006969 4.4e-56 221.9 177 63.8
CSS0020752 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 4.4e-56 221.9 179 62.6
FAN12G1674 Fragaria x ananassa HOM05D005578 ORTHO05D006969 5.7e-56 221.5 178 64.6
FAN12G2406 Fragaria x ananassa HOM05D005578 ORTHO05D006969 5.7e-56 221.5 178 64.6
CANSAT78G2511 Cannabis sativa HOM05D005578 ORTHO05D006969 7.5e-56 221.1 179 64.2
QL10p053362 Quercus lobata HOM05D005578 ORTHO05D006969 7.5e-56 221.1 184 63.0
QL10p054496 Quercus lobata HOM05D005578 ORTHO05D006969 7.5e-56 221.1 181 64.1
Hma1.2p1_0150F.1_g066670 Hydrangea macrophylla HOM05D005578 ORTHO05D006969 9.8e-56 220.7 187 63.1
TAR365G0588 Trochodendron aralioides HOM05D005578 ORTHO05D006969 9.8e-56 220.7 177 68.4
Eucgr.A00019 Eucalyptus grandis HOM05D005578 ORTHO05D006969 1.3e-55 220.3 176 65.3
CSS0022855 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 1.7e-55 219.9 179 63.7
CsaV3_4G002830 Cucumis sativus L. HOM05D005578 ORTHO05D006969 2.2e-55 219.5 174 64.4
Rhsim09G0010700 Rhododendron simsii HOM05D005578 ORTHO05D006969 4.9e-55 218.4 180 63.3
MBI08_g25556_MAGBIO Magnolia biondii HOM05D005578 ORTHO05D006969 6.3e-55 218.0 177 62.7
CANSAT35G1372 Cannabis sativa HOM05D005578 ORTHO05D006969 8.3e-55 217.6 179 63.7
TWI63G0500 Tripterygium wilfordii HOM05D005578 ORTHO05D006969 1.8e-54 216.5 180 61.7
Nitab4.5_0000387g0110 Nicotiana tabacum HOM05D005578 ORTHO05D006969 4.1e-54 215.3 177 65.0
Ciclev10020255m.g Citrus clementina HOM05D005578 ORTHO05D006969 1.6e-53 213.4 182 61.5
Lj3A157G51 Lonicera japonica HOM05D005578 ORTHO05D006969 2.0e-53 213.0 184 61.4
PGR083G2150 Punica granatum HOM05D005578 ORTHO05D006969 2.0e-53 213.0 180 61.1
SalBow4G1988 Salvia bowleyana HOM05D005578 ORTHO05D006969 4.5e-53 211.8 176 60.8
Cc00_g24800 Coffea canephora HOM05D005578 ORTHO05D006969 5.9e-53 211.5 176 62.5
Migut.N01914 Erythranthe guttata HOM05D005578 ORTHO05D006969 5.9e-53 211.5 176 60.8
vmacro00704 Vaccinium macrocarpon HOM05D005578 ORTHO05D006969 5.9e-53 211.5 180 61.7
Peaxi162Scf00568g00519 Petunia axillaris HOM05D005578 ORTHO05D006969 7.7e-53 211.1 177 63.3
CAN.G128.150 Capsicum annuum HOM05D005578 ORTHO05D006969 1.0e-52 210.7 174 64.4
COL.COLO4_38536 Corchorus olitorius HOM05D005578 ORTHO05D006969 1.7e-52 209.9 198 57.6
SalBow4G1580 Salvia bowleyana HOM05D005578 ORTHO05D006969 1.7e-52 209.9 176 60.2
Cc03_g13760 Coffea canephora HOM05D005578 ORTHO05D006969 2.9e-52 209.1 176 61.9
Nn3g18569 Nelumbo nucifera HOM05D005578 ORTHO05D006969 3.8e-52 208.8 180 60.0
Ah.01g024150 Amaranthus hybridus HOM05D005578 ORTHO05D006969 1.1e-51 207.2 177 59.9
CDE08G0459 Ceratophyllum demersum HOM05D005578 ORTHO05D006969 1.1e-51 207.2 181 57.5
Cpa.g.sc9.352 Carica papaya HOM05D005578 ORTHO05D006969 2.5e-51 206.1 176 61.4
Solyc10g081540.2 Solanum lycopersicum HOM05D005578 ORTHO05D006969 2.5e-51 206.1 174 63.2
Sopen10g032050 Solanum pennellii HOM05D005578 ORTHO05D006969 2.5e-51 206.1 174 63.2
PGSC0003DMG400028219 Solanum tuberosum HOM05D005578 ORTHO05D006969 2.5e-51 206.1 174 63.2
DCAR_028436 Daucus carota HOM05D005578 ORTHO05D006969 1.6e-50 203.4 187 57.2
PSO017G0139 Papaver somniferum HOM05D005578 ORTHO05D006969 2.1e-50 203.0 180 57.8
HanXRQChr02g0059791 Helianthus annuus HOM05D005578 ORTHO05D006969 6.1e-50 201.4 179 55.3
PSO478G3531 Papaver somniferum HOM05D005578 ORTHO05D006969 8.0e-50 201.1 180 57.8
Sc18g0007160 Simmondsia chinensis HOM05D005578 ORTHO05D006969 8.0e-50 201.1 175 60.6
Lsat_1_v5_gn_2_34381 Lactuca sativa HOM05D005578 ORTHO05D006969 1.8e-49 199.9 181 55.8
Aqoxy5G03977 Aquilegia oxysepala HOM05D005578 ORTHO05D006969 3.0e-49 199.1 177 58.2
PSO675G5381 Papaver somniferum HOM05D005578 ORTHO05D006969 3.0e-49 199.1 183 56.3
EL10Ac9g22122 Beta vulgaris HOM05D005578 ORTHO05D006969 5.2e-49 198.4 177 57.1
THA.LOC104802321 Tarenaya hassleriana HOM05D005578 ORTHO05D006969 6.8e-49 198.0 184 55.4
AUR62027084 Chenopodium quinoa HOM05D005578 ORTHO05D006969 8.9e-49 197.6 177 57.6
ECA232G2403 Erigeron canadensis HOM05D005578 ORTHO05D006969 1.2e-48 197.2 184 56.0
AUR62030923 Chenopodium quinoa HOM05D005578 ORTHO05D006969 2.6e-48 196.1 177 57.1
Hund00394 Selenicereus undatus HOM05D005578 ORTHO05D006969 9.8e-48 194.1 177 56.5
MSTRG.28018 Avicennia marina HOM05D005578 ORTHO05D006969 3.7e-47 192.2 176 56.8
BcaC07g40493 Brassica carinata HOM05D005578 ORTHO05D006969 8.3e-47 191.0 184 53.3
A09p51890 Brassica napus HOM05D005578 ORTHO05D006969 8.3e-47 191.0 184 53.3
C08p34620 Brassica napus HOM05D005578 ORTHO05D006969 8.3e-47 191.0 184 53.3
BolC8t51064H Brassica oleracea HOM05D005578 ORTHO05D006969 8.3e-47 191.0 184 53.3
BraA09t40625Z Brassica rapa HOM05D005578 ORTHO05D006969 8.3e-47 191.0 184 53.3
Os11g0265600 Oryza sativa ssp. japonica HOM05D005578 ORTHO05D006969 3.2e-46 189.1 172 55.8
Thhalv10028620m.g Eutrema salsugineum HOM05D005578 ORTHO05D006969 4.1e-46 188.7 185 54.1
SEGI_35608 Sequoiadendron giganteum HOM05D005578 ORTHO05D006969 4.1e-46 188.7 181 54.1
Sp5g03550 Schrenkiella parvula HOM05D005578 ORTHO05D006969 9.2e-46 187.6 183 54.6
AL5G41540 Arabidopsis lyrata HOM05D005578 ORTHO05D006969 1.2e-45 187.2 185 53.0
BcaC07g40470 Brassica carinata HOM05D005578 ORTHO05D006969 2.7e-45 186.0 187 52.9
CARHR220950 Cardamine hirsuta HOM05D005578 ORTHO05D006969 2.7e-45 186.0 188 53.7
Carub.0005s2633 Capsella rubella HOM05D005578 ORTHO05D006969 3.5e-45 185.7 182 52.7
HPP92_007603 Vanilla planifolia HOM05D005578 ORTHO05D006969 3.5e-45 185.7 163 58.3
SHI16665 Sapria himalayana HOM05D005578 ORTHO05D006969 7.8e-45 184.5 180 55.6
AT3G59630 Arabidopsis thaliana HOM05D005578 ORTHO05D006969 1.0e-44 184.1 182 53.3
Zm00001eb064030 Zea mays HOM05D005578 ORTHO05D006969 3.0e-44 182.6 173 54.9
Haze_01375 Corylus avellana HOM05D005578 ORTHO05D006969 5.0e-44 181.8 270 43.0
Aa31LG10G13930 Aethionema arabicum HOM05D005578 ORTHO05D006969 8.0e-42 174.5 217 46.1
Thhalv10005976m.g Eutrema salsugineum HOM05D005578 ORTHO05D006969 5.8e-40 168.3 128 64.1
AL5G41610 Arabidopsis lyrata HOM05D005578 ORTHO05D006969 1.3e-39 167.2 141 60.3
unitig_21.g20051 Utricularia gibba HOM05D005578 ORTHO05D006969 4.1e-38 162.2 142 54.9
SGA_v2.0_scaffold81G26092 Striga asiatica HOM05D005578 ORTHO05D006969 6.2e-34 148.3 276 36.2
Mapoly0065s0036 Marchantia polymorpha HOM05D005578 ORTHO05D006969 8.1e-34 147.9 177 44.1
AL5G41640 Arabidopsis lyrata HOM05D005578 ORTHO05D006969 4.1e-30 135.6 151 48.3
Pp3c8_4090 Physcomitrium patens HOM05D005578 ORTHO05D006969 7.1e-30 134.8 182 45.1
SMO203G0280 Selaginella moellendorffii HOM05D005578 ORTHO05D006969 1.6e-29 133.7 117 49.6
FvH4_4g10580 Fragaria vesca HOM05D005578 ORTHO05D006969 2.3e-28 129.8 69 87.0
AagrBONN_evm.TU.Sc2ySwM_117.2191 Anthoceros agrestis HOM05D005578 ORTHO05D006969 1.1e-27 127.5 212 38.7
MELO3C017758.2 Cucumis melo HOM05D005578 ORTHO05D006969 2.5e-27 126.3 70 84.3
Nitab4.5_0002087g0070 Nicotiana tabacum HOM05D005578 ORTHO05D006969 4.3e-27 125.6 70 84.3
Cc00_g21820 Coffea canephora HOM05D005578 ORTHO05D006969 7.3e-27 124.8 70 80.0
CBR_g26331 Chara braunii HOM05D005578 ORTHO05D006969 3.5e-21 105.9 71 67.6
PRCOL_00000644 Prasinoderma coloniale HOM05D005578 ORTHO05D006969 8.6e-20 101.3 137 42.3
MCO11G524 Micromonas commoda HOM05D005578 ORTHO05D006969 7.3e-19 98.2 116 41.4
Cre08.g376150 Chlamydomonas reinhardtii HOM05D005578 ORTHO05D006969 9.9e-16 87.8 90 44.4
Cfa025460 Carpinus fangiana HOM05D005578 ORTHO05D006969 3.0e-12 76.3 103 36.9
TPR.G2494 Trifolium pratense HOM05D005578 ORTHO05D006969 1.4e-09 67.4 52 69.2
TPR.G17732 Trifolium pratense HOM05D005578 ORTHO05D006969 2.2e-07 60.1 63 49.2
Psat6g092640 Pisum sativum HOM05D005578 ORTHO05D006969 5.4e-06 55.5 34 70.6


User provided reference genes

Program Settings