Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 4.0e-287 990.7 500 100.0
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.4e-252 875.9 504 89.3
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 6.7e-226 787.3 524 80.2
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 3.3e-204 715.3 526 73.6
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.6e-182 643.3 484 70.7
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 3.0e-181 639.0 487 70.2
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 1.2e-177 627.1 467 71.5
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.4e-175 619.4 515 66.0
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 1.1e-164 583.9 510 63.1
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 9.3e-159 564.3 526 62.5
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 1.6e-158 563.5 545 60.9
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 2.3e-157 559.7 541 59.7
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 9.3e-143 511.1 502 58.0
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 3.5e-142 509.2 480 60.4
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 2.5e-140 503.1 531 57.8
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 6.9e-138 495.0 504 57.3
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 6.5e-136 488.4 378 69.3
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 2.1e-134 483.4 475 58.3
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 6.3e-131 471.9 531 54.6
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 1.0e-128 464.5 486 55.6
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 3.8e-128 462.6 437 59.3
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.1e-126 456.8 598 49.3
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 2.7e-126 456.4 514 53.1
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 7.9e-126 454.9 484 55.4
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.0e-125 454.5 469 56.5
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.8e-125 453.8 537 51.4
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.3e-125 453.4 446 58.5
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.5e-124 450.7 534 52.2
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 4.4e-124 449.1 478 55.4
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 1.3e-123 447.6 443 57.8
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 2.2e-123 446.8 469 56.1
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 3.1e-122 443.0 443 56.4
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 7.7e-121 438.3 467 55.9
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.0e-120 438.0 501 53.3
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.0e-120 438.0 485 52.2
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 2.9e-120 436.4 512 51.8
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 3.8e-120 436.0 441 55.8
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 3.8e-120 436.0 479 53.4
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 6.5e-120 435.3 512 51.8
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 8.5e-120 434.9 479 53.4
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.5e-119 434.1 485 53.0
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 2.5e-119 433.3 485 53.2
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 2.5e-119 433.3 464 54.3
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 3.2e-119 433.0 489 53.0
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.2e-118 431.0 508 52.0
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 1.2e-118 431.0 470 53.4
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.6e-118 430.6 433 56.6
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.1e-118 430.3 467 54.8
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 4.7e-118 429.1 533 49.9
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 4.7e-118 429.1 533 50.5
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 6.1e-118 428.7 499 51.9
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.0e-117 427.9 501 51.7
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 2.3e-117 426.8 479 52.2
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 2.2e-115 420.2 397 57.9
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 3.7e-115 419.5 539 49.0
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.1e-114 417.9 491 50.3
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.8e-114 417.2 460 54.3
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 4.5e-113 412.5 473 53.1
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 5.9e-113 412.1 646 43.3
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 7.7e-113 411.8 465 51.6
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 1.0e-112 411.4 416 54.8
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 2.2e-112 410.2 405 55.8
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 2.9e-112 409.8 464 52.4
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 3.8e-112 409.5 414 55.1
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.6e-110 404.1 451 53.2
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.3e-109 400.2 485 48.7
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 4.0e-109 399.4 520 48.3
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.5e-108 397.5 520 48.5
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.5e-108 397.5 520 48.5
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 7.5e-108 395.2 371 56.9
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.2e-107 393.7 460 51.5
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 2.8e-107 393.3 538 48.7
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 2.7e-105 386.7 484 47.9
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.1e-103 381.3 499 47.1
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 3.4e-100 369.8 398 51.8
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 5.7e-100 369.0 400 51.0
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.8e-99 366.7 439 49.7
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 4.9e-99 365.9 501 45.3
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 4.9e-99 365.9 402 50.2
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 1.8e-98 364.0 340 55.9
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 9.1e-98 361.7 458 47.4
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 1.6e-97 360.9 496 45.4
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 2.7e-97 360.1 515 43.9
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.3e-96 357.1 364 54.7
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 3.8e-96 356.3 358 52.8
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 5.5e-95 352.4 359 52.4
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.2e-94 351.3 362 52.5
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.8e-94 350.1 440 47.7
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.8e-94 350.1 462 47.2
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.0e-93 348.2 501 43.7
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 3.4e-92 343.2 471 46.9
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 4.4e-92 342.8 363 52.3
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.7e-91 340.9 432 47.9
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 2.9e-91 340.1 362 53.3
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 3.7e-91 339.7 461 46.4
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.7e-91 339.7 299 58.2
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 3.7e-91 339.7 354 54.0
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.4e-90 337.0 467 43.5
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 5.4e-90 335.9 334 53.0
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 7.0e-90 335.5 368 52.4
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 7.0e-90 335.5 334 53.0
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 9.2e-90 335.1 334 52.7
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 9.2e-90 335.1 497 45.7
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.6e-89 334.3 485 45.4
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 3.5e-89 333.2 476 45.0
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.7e-88 330.9 403 49.1
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 3.9e-88 329.7 334 52.4
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 3.9e-88 329.7 334 52.4
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.1e-87 328.2 388 49.2
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.9e-87 327.4 453 44.2
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.9e-87 327.4 373 50.9
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 3.6e-86 323.2 371 50.1
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 3.6e-86 323.2 371 50.1
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 6.1e-86 322.4 372 50.0
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 5.2e-85 319.3 243 70.4
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.9e-83 313.5 273 59.0
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.1e-82 309.7 286 57.7
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 2.7e-81 307.0 396 47.0
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 1.0e-80 305.1 478 42.3
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 2.5e-79 300.4 369 45.0
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 3.3e-79 300.1 382 46.3
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.1e-78 297.4 447 41.4
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 6.2e-78 295.8 344 47.7
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.1e-78 295.4 274 57.3
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 4.0e-77 293.1 339 49.0
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.9e-75 286.2 269 56.5
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.4e-75 285.8 232 63.4
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.4e-74 283.9 459 39.4
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 2.1e-73 280.8 532 39.8
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 6.0e-65 252.7 290 54.1
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 8.6e-64 248.8 299 46.5
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 7.3e-63 245.7 249 56.2
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.6e-60 237.3 251 56.2
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 4.4e-60 236.5 391 36.3
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 4.4e-60 236.5 302 47.4
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.3e-59 235.0 284 50.4
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.5e-49 200.3 283 43.5
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 7.3e-47 192.6 189 54.0
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 1.3e-40 171.8 351 35.9
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 2.8e-38 164.1 200 47.0
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 4.9e-35 153.3 455 31.0
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 6.7e-32 142.9 368 31.8
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.0e-28 131.3 233 43.3
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.2e-26 124.0 182 40.1
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 8.7e-24 115.9 264 33.3
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 5.7e-23 113.2 200 35.0
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 6.5e-19 99.8 182 42.9
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 5.5e-18 96.7 139 42.4
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.3e-15 87.0 148 40.5
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.1e-07 62.4 56 51.8
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.3e-07 60.8 41 68.3
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 3.3e-07 60.8 84 41.7
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 4.4e-07 60.5 78 39.7


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