Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L002937 Phaseolus vulgaris HOM05D003666 ORTHO05D004770 1.0e-38 162.9 80 100.0
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 9.7e-18 93.2 62 79.0
Lsat_1_v5_gn_3_105380 Lactuca sativa HOM05D003666 ORTHO05D004770 1.7e-17 92.4 62 77.4
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 1.7e-17 92.4 62 77.4
arahy.Tifrunner.gnm1.ann1.AQ5GJP Arachis hypogaea HOM05D003666 ORTHO05D004770 3.7e-17 91.3 62 77.4
Cfa023044 Carpinus fangiana HOM05D003666 ORTHO05D004770 6.3e-17 90.5 62 77.4
Dinv06695 Davidia involucrata HOM05D003666 ORTHO05D004770 6.3e-17 90.5 62 77.4
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 6.3e-17 90.5 62 77.4
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 6.3e-17 90.5 62 77.4
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 1.1e-16 89.7 59 81.4
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.4e-16 89.4 62 77.4
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 3.1e-16 88.2 62 75.8
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 3.1e-16 88.2 62 75.8
arahy.Tifrunner.gnm1.ann1.W0GCEN Arachis hypogaea HOM05D003666 ORTHO05D004770 8.5e-14 80.1 56 76.8
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-13 79.7 62 71.0
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-13 79.7 62 71.0
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-13 79.7 62 71.0
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-13 79.7 62 71.0
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 3.2e-13 78.2 62 67.7
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 7.2e-13 77.0 62 67.7
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 7.2e-13 77.0 62 67.7
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.2e-12 76.3 62 71.0
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.2e-12 76.3 62 71.0
BolSC28t60439H Brassica oleracea HOM05D003666 ORTHO05D004770 4.4e-10 67.8 61 62.3
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 9.1e-08 60.1 42 76.2
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 9.1e-08 60.1 47 70.2
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.2e-07 59.7 43 74.4
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 2.7e-07 58.5 45 71.1
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 5.9e-07 57.4 42 73.8
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 5.9e-07 57.4 42 73.8
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 5.9e-07 57.4 42 73.8
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.7e-06 55.8 45 66.7
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 8.5e-06 53.5 39 74.4


User provided reference genes

Program Settings