Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.0e-105 385.2 197 100.0
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.8e-82 308.9 186 84.9
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 5.2e-81 304.7 196 80.1
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 2.3e-76 289.3 189 79.9
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 8.4e-71 270.8 192 71.9
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.5e-67 260.0 196 68.9
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 3.6e-66 255.4 182 73.1
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.3e-60 236.1 205 62.0
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.6e-60 234.6 179 68.2
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.0e-52 210.7 154 70.8
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 5.1e-52 208.4 195 57.4
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 6.7e-52 208.0 182 63.7
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 4.3e-51 205.3 195 56.9
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 2.1e-50 203.0 190 55.8
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.8e-50 202.6 179 60.3
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 8.1e-50 201.1 155 65.2
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 1.1e-49 200.7 145 70.3
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 2.4e-49 199.5 155 64.5
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 4.5e-48 195.3 159 62.3
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 5.8e-48 194.9 133 72.9
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 7.6e-48 194.5 168 59.5
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.3e-47 193.7 165 58.8
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 2.2e-47 193.0 182 57.7
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 3.8e-47 192.2 182 55.5
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.1e-46 190.7 163 59.5
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.1e-46 190.7 150 63.3
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.4e-46 190.3 184 54.9
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.4e-46 190.3 164 63.4
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.9e-46 189.9 181 57.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 5.5e-46 188.3 178 55.6
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 5.5e-46 188.3 164 61.6
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 7.1e-46 188.0 181 56.9
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 2.7e-45 186.0 178 55.1
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 4.6e-45 185.3 168 57.1
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 4.6e-45 185.3 175 57.1
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.3e-44 183.7 161 57.1
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.8e-44 183.3 155 60.6
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.3e-44 183.0 181 53.6
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 2.3e-44 183.0 181 53.6
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 3.0e-44 182.6 160 59.4
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 8.7e-44 181.0 181 53.0
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.5e-43 180.3 169 55.6
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 4.3e-43 178.7 179 53.6
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 5.7e-43 178.3 179 55.9
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.2e-42 174.9 159 60.4
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 6.2e-42 174.9 157 57.3
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 8.2e-42 174.5 185 50.3
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-41 173.7 158 59.5
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.4e-41 172.9 159 58.5
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.4e-41 172.9 181 54.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 4.0e-41 172.2 163 53.4
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 9.0e-41 171.0 151 58.9
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.2e-40 170.6 157 54.8
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.5e-40 170.2 159 54.1
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.5e-40 170.2 152 57.9
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.0e-40 169.9 176 54.0
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 2.6e-40 169.5 183 50.3
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 3.4e-40 169.1 162 53.7
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 3.4e-40 169.1 153 54.9
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 4.5e-40 168.7 154 53.9
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 5.8e-40 168.3 139 60.4
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 7.6e-40 167.9 154 55.8
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 7.6e-40 167.9 195 47.7
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.0e-39 167.5 178 53.4
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.3e-39 167.2 179 52.5
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 3.8e-39 165.6 158 51.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 6.5e-39 164.9 181 50.3
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 8.4e-39 164.5 157 52.9
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.1e-38 164.1 172 52.3
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.4e-38 163.7 177 53.7
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-38 163.7 189 52.4
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.4e-38 163.7 197 47.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.4e-38 163.7 151 58.9
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 5.5e-38 161.8 167 52.1
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.6e-37 160.2 154 51.3
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 2.1e-37 159.8 157 52.9
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 2.1e-37 159.8 157 48.4
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.1e-37 159.8 151 58.3
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.5e-37 159.1 176 45.5
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.5e-37 159.1 176 45.5
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 4.6e-37 158.7 157 48.4
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 4.6e-37 158.7 151 57.6
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 7.9e-37 157.9 171 46.2
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.0e-36 157.5 142 55.6
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.3e-36 157.1 154 55.8
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 2.3e-36 156.4 171 46.2
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.3e-36 156.4 171 49.1
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 3.0e-36 156.0 157 48.4
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 5.1e-36 155.2 171 46.2
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 8.7e-36 154.5 193 45.1
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.1e-35 154.1 139 59.7
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 1.5e-35 153.7 126 61.9
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.8e-34 149.4 137 59.1
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 8.2e-34 147.9 146 50.7
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.4e-33 147.1 181 48.1
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.8e-33 146.7 151 56.3
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 5.3e-33 145.2 183 50.3
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.2e-32 144.1 168 47.0
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-32 143.3 142 53.5
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 4.5e-32 142.1 180 43.9
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 1.7e-31 140.2 127 58.3
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.2e-31 139.8 120 59.2
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.4e-28 130.6 146 52.7
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 4.8e-26 122.1 171 41.5
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.9e-23 112.8 106 57.5
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.9e-22 110.2 119 42.9
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.4e-20 104.0 91 54.9
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 4.4e-19 99.0 80 57.5
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.3e-11 72.8 69 55.1
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 3.3e-11 72.8 156 35.9
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 4.4e-11 72.4 58 60.3
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.3e-10 70.9 131 32.1
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 7.7e-08 61.6 36 77.8


User provided reference genes

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