Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 0.0e+00 1381.3 715 100.0
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 1.7e-310 1068.9 726 79.2
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 7.7e-207 724.5 731 59.1
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 5.5e-205 718.4 785 54.6
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 2.0e-194 683.3 780 52.7
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 3.5e-191 672.5 783 52.7
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 1.7e-190 670.2 788 52.7
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 2.7e-188 662.9 808 52.5
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 3.7e-185 652.5 474 74.1
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 4.2e-181 639.0 775 50.8
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 3.6e-148 529.6 712 47.2
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 1.4e-123 448.0 725 40.8
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 2.0e-122 444.1 727 41.5
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 3.4e-122 443.4 406 58.6
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 1.2e-119 434.9 738 40.7
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 6.0e-119 432.6 406 58.1
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 5.1e-118 429.5 776 39.8
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 8.7e-118 428.7 726 41.2
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.1e-117 428.3 650 41.5
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 4.3e-117 426.4 406 55.7
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 5.6e-117 426.0 431 56.1
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 5.6e-117 426.0 762 37.9
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 6.2e-116 422.5 387 58.9
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 6.2e-116 422.5 751 39.7
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 4.0e-115 419.9 396 55.8
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 5.3e-115 419.5 788 38.2
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 6.9e-115 419.1 835 36.5
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 6.9e-115 419.1 741 40.6
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 1.2e-114 418.3 737 38.4
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 2.6e-114 417.2 739 39.4
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 4.5e-114 416.4 762 38.6
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 6.5e-113 412.5 346 60.1
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 1.1e-112 411.8 403 53.1
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 1.1e-112 411.8 740 39.3
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 1.4e-112 411.4 725 40.1
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 1.4e-112 411.4 741 38.7
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 3.2e-112 410.2 343 61.2
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 5.5e-112 409.5 726 40.5
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 1.6e-111 407.9 530 45.8
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 2.7e-111 407.1 336 61.0
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 2.7e-111 407.1 338 60.9
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 6.0e-111 406.0 393 56.0
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.0e-110 405.2 740 38.9
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 3.9e-110 403.3 378 57.7
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 5.1e-110 402.9 737 38.4
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 5.1e-110 402.9 466 48.1
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 4.3e-109 399.8 741 40.2
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 1.6e-108 397.9 410 53.9
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 4.8e-108 396.4 502 44.8
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.8e-108 396.4 739 39.1
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 1.0e-105 388.7 369 53.1
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 1.7e-105 387.9 339 57.2
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 2.2e-105 387.5 344 57.3
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 5.0e-105 386.3 408 53.2
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 1.4e-104 384.8 387 51.2
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 1.4e-104 384.8 412 51.2
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 1.9e-104 384.4 359 55.2
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 1.9e-104 384.4 420 50.2
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 1.9e-104 384.4 719 38.4
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 5.5e-104 382.9 341 58.9
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 1.0e-102 378.6 405 50.9
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 1.4e-102 378.3 702 39.3
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.4e-102 378.3 340 57.1
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 3.0e-102 377.1 411 49.6
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 3.0e-102 377.1 719 37.8
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 5.1e-102 376.3 336 56.5
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 6.7e-102 375.9 738 37.1
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 1.1e-101 375.2 336 57.4
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 1.1e-101 375.2 723 37.8
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 4.3e-101 373.2 726 37.5
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 4.3e-101 373.2 382 50.5
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 7.4e-101 372.5 369 52.0
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 9.7e-101 372.1 434 47.5
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 4.8e-100 369.8 341 54.5
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 1.1e-99 368.6 727 36.7
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 1.1e-99 368.6 356 53.7
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 5.3e-99 366.3 708 37.4
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.5e-98 364.8 364 52.5
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 2.0e-98 364.4 345 55.1
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 3.4e-98 363.6 304 59.5
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 5.9e-98 362.8 604 39.1
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 7.7e-98 362.5 571 41.0
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 1.0e-97 362.1 729 36.9
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 5.0e-97 359.8 363 52.9
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 2.5e-96 357.5 467 46.5
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 4.2e-96 356.7 368 51.9
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 7.2e-96 355.9 368 51.9
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 7.2e-96 355.9 368 51.9
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 7.2e-96 355.9 747 34.8
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 3.9e-94 350.1 204 86.3
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 8.8e-94 349.0 367 50.7
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 2.0e-93 347.8 366 51.4
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 7.4e-93 345.9 367 50.7
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 2.8e-92 344.0 313 56.9
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 3.7e-92 343.6 534 41.4
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 4.8e-92 343.2 365 51.0
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 4.8e-92 343.2 365 51.0
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 1.1e-91 342.0 362 51.4
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 1.4e-91 341.7 376 49.2
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 1.2e-90 338.6 379 50.1
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 3.5e-90 337.0 374 48.9
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 4.5e-90 336.7 374 48.9
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 4.5e-90 336.7 304 55.6
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 1.7e-89 334.7 835 33.8
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 4.2e-88 330.1 343 52.5
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 1.2e-87 328.6 731 35.2
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 3.6e-87 327.0 333 50.8
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 6.7e-86 322.8 307 52.4
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 2.8e-76 290.8 239 62.8
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 8.9e-62 242.7 631 33.6
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 1.5e-61 241.9 205 57.6
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.4e-59 235.3 233 52.8
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 2.3e-57 228.0 365 37.8
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 2.9e-57 227.6 338 39.1
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 6.8e-54 216.5 295 42.4
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 7.8e-50 203.0 334 40.4
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 6.8e-46 189.9 147 70.1
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 3.2e-43 181.0 539 29.3
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 5.6e-32 143.7 113 61.1
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 2.1e-31 141.7 521 28.8
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 1.1e-27 129.4 141 47.5
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.4e-27 129.0 122 54.9
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 1.3e-25 122.5 281 29.9
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 1.7e-25 122.1 144 48.6
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.8e-22 112.1 110 53.6
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 7.6e-21 106.7 96 55.2
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 1.7e-20 105.5 128 43.0
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 2.1e-15 88.6 69 63.8
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 1.1e-14 86.3 174 28.7
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 7.1e-11 73.6 55 67.3
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 7.1e-11 73.6 55 67.3
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 2.7e-10 71.6 55 60.0
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.9e-08 65.5 81 44.4
QL01p034573 Quercus lobata HOM05D005647 ORTHO05D006968 6.9e-06 57.0 55 54.5


User provided reference genes

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