Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.4e-54 216.1 109 100.0
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 9.7e-53 209.9 109 97.2
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 8.8e-46 186.8 110 83.6
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 1.8e-43 179.1 110 83.6
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 5.9e-26 120.9 104 66.3
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 7.7e-26 120.6 105 64.8
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 8.6e-25 117.1 106 62.3
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 1.1e-24 116.7 111 62.2
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 4.2e-24 114.8 82 72.0
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 3.6e-23 111.7 112 61.6
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 8.0e-23 110.5 108 57.4
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 1.4e-22 109.8 108 56.5
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 1.8e-22 109.4 109 56.0
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 5.2e-22 107.8 107 55.1
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 8.9e-22 107.1 109 55.0
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 1.2e-21 106.7 113 61.1
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 5.7e-21 104.4 112 56.2
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 9.8e-21 103.6 111 52.3
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 3.7e-20 101.7 89 66.3
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 6.3e-20 100.9 110 54.5
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 8.3e-20 100.5 110 56.4
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 1.1e-19 100.1 85 65.9
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 1.4e-19 99.8 87 59.8
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 1.8e-19 99.4 103 55.3
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 4.1e-19 98.2 96 58.3
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 9.2e-19 97.1 111 54.1
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 2.0e-18 95.9 86 57.0
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.7e-18 95.5 86 55.8
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.7e-18 95.5 86 55.8
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 2.7e-18 95.5 104 54.8
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 3.5e-18 95.1 67 74.6
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 3.5e-18 95.1 109 53.2
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 3.5e-18 95.1 106 52.8
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 3.5e-18 95.1 111 52.3
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 7.8e-18 94.0 111 51.4
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 7.8e-18 94.0 65 76.9
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 1.7e-17 92.8 111 50.5
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 3.8e-17 91.7 82 62.2
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 5.0e-17 91.3 111 47.7
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 5.0e-17 91.3 102 50.0
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 5.0e-17 91.3 102 50.0
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 6.6e-17 90.9 113 54.0
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 6.6e-17 90.9 104 52.9
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 8.6e-17 90.5 102 48.0
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 8.6e-17 90.5 86 60.5
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 8.6e-17 90.5 109 49.5
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.5e-16 89.7 111 46.8
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.5e-16 89.7 102 49.0
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 1.5e-16 89.7 106 47.2
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 2.5e-16 89.0 111 47.7
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 3.3e-16 88.6 112 47.3
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 3.3e-16 88.6 104 52.9
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 3.3e-16 88.6 109 50.5
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 3.3e-16 88.6 109 52.3
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 5.6e-16 87.8 111 48.6
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 7.3e-16 87.4 81 63.0
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 7.3e-16 87.4 111 48.6
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 1.6e-15 86.3 82 57.3
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 1.6e-15 86.3 104 46.2
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.1e-15 85.9 106 45.3
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 2.1e-15 85.9 103 48.5
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 3.6e-15 85.1 111 45.9
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.0e-14 83.6 84 56.0
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 1.0e-14 83.6 110 45.5
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 1.8e-14 82.8 108 43.5
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 2.3e-14 82.4 87 55.2
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 4.0e-14 81.6 110 46.4
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 5.2e-14 81.3 134 44.0
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 8.9e-14 80.5 111 48.6
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.2e-13 80.1 85 49.4
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 1.2e-13 80.1 72 59.7
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 2.6e-13 79.0 127 40.9
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 2.6e-13 79.0 109 45.9
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.4e-13 78.6 73 58.9
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 5.8e-13 77.8 90 52.2
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 7.5e-13 77.4 109 45.0
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 9.8e-13 77.0 106 43.4
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 9.8e-13 77.0 87 50.6
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 1.3e-12 76.6 104 46.2
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.3e-12 76.6 69 63.8
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.3e-12 76.6 73 57.5
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.3e-12 76.6 78 56.4
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 2.2e-12 75.9 105 46.7
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 2.9e-12 75.5 106 47.2
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 3.7e-12 75.1 81 51.9
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 4.9e-12 74.7 106 46.2
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 4.9e-12 74.7 65 60.0
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 4.9e-12 74.7 65 60.0
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 1.4e-11 73.2 60 61.7
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 2.4e-11 72.4 87 54.0
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 2.4e-11 72.4 85 48.2
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 3.2e-11 72.0 105 45.7
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 3.2e-11 72.0 105 45.7
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 3.2e-11 72.0 78 51.3
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 4.1e-11 71.6 82 50.0
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 5.4e-11 71.2 84 51.2
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 9.2e-11 70.5 69 53.6
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 1.2e-10 70.1 104 44.2
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 2.7e-10 68.9 62 59.7
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 2.7e-10 68.9 84 46.4
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 2.7e-10 68.9 72 50.0
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 3.5e-10 68.6 79 49.4
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 3.5e-10 68.6 103 41.7
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 7.8e-10 67.4 43 79.1
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 1.3e-09 66.6 45 73.3
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 1.3e-09 66.6 56 64.3
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 1.7e-09 66.2 58 60.3
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 2.3e-09 65.9 58 60.3
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 2.3e-09 65.9 58 60.3
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 2.3e-09 65.9 58 60.3
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 5.0e-09 64.7 58 58.6
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 5.0e-09 64.7 58 58.6
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 5.0e-09 64.7 58 58.6
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 5.0e-09 64.7 58 58.6
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 6.6e-09 64.3 87 46.0
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 1.1e-08 63.5 60 61.7
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 2.5e-08 62.4 62 58.1
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 3.3e-08 62.0 59 61.0
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 4.3e-08 61.6 58 56.9
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 4.3e-08 61.6 58 56.9
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 4.3e-08 61.6 85 43.5
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 5.6e-08 61.2 78 50.0
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 1.6e-07 59.7 57 54.4
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 1.6e-07 59.7 96 42.7
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 1.6e-07 59.7 96 42.7
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 1.6e-07 59.7 96 42.7
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 2.1e-07 59.3 72 50.0
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 3.6e-07 58.5 66 48.5
AUR62002181 Chenopodium quinoa HOM05D005475 ORTHO05D006575 6.2e-07 57.8 103 40.8
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 6.2e-07 57.8 44 61.4
AUR62015529 Chenopodium quinoa HOM05D005475 ORTHO05D006575 8.0e-07 57.4 103 40.8
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 8.0e-07 57.4 63 50.8
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 4.0e-06 55.1 83 42.2


User provided reference genes

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