Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.2e-35 151.8 77 100.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.2e-35 151.8 77 100.0
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 2.1e-30 135.2 72 91.7
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.1e-30 135.2 72 91.7
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.8e-30 134.0 72 90.3
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.2e-28 129.4 73 86.3
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.0e-27 126.3 72 81.9
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.0e-27 126.3 72 83.3
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 1.0e-27 126.3 72 83.3
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 1.3e-27 125.9 72 84.7
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 8.4e-27 123.2 73 80.8
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.5e-26 121.7 72 80.6
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.5e-26 121.7 74 78.4
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 3.2e-26 121.3 72 83.3
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 3.2e-26 121.3 74 77.0
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 3.2e-26 121.3 74 79.7
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 7.1e-26 120.2 74 77.0
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 7.1e-26 120.2 71 77.5
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 7.1e-26 120.2 74 77.0
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 9.3e-26 119.8 74 75.7
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 9.3e-26 119.8 74 75.7
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 9.3e-26 119.8 72 79.2
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.2e-25 119.4 76 75.0
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-25 119.4 77 74.0
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.2e-25 119.4 72 79.2
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.2e-25 119.4 72 77.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.7e-25 118.2 74 78.4
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.7e-25 118.2 72 79.2
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.5e-25 117.9 74 75.7
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 4.6e-25 117.5 69 79.7
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 6.0e-25 117.1 69 79.7
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 6.0e-25 117.1 72 79.2
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.0e-25 117.1 72 79.2
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.0e-25 117.1 72 79.2
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 6.0e-25 117.1 72 79.2
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 6.0e-25 117.1 72 77.8
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.0e-25 117.1 72 77.8
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.0e-25 117.1 72 77.8
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 6.0e-25 117.1 74 78.4
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 7.9e-25 116.7 85 71.8
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 7.9e-25 116.7 72 77.8
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 7.9e-25 116.7 72 79.2
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.0e-24 116.3 69 78.3
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.8e-24 115.5 72 77.8
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.3e-24 115.2 74 77.0
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 3.0e-24 114.8 69 78.3
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.0e-24 114.8 72 76.4
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 3.0e-24 114.8 70 78.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.0e-24 114.8 72 75.0
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 8.7e-24 113.2 71 80.3
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 8.7e-24 113.2 73 71.2
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.5e-23 112.5 72 76.4
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.5e-23 112.5 71 73.2
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.9e-23 112.1 71 70.4
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.9e-23 112.1 72 75.0
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 3.3e-23 111.3 72 73.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 4.3e-23 110.9 72 76.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 7.4e-23 110.2 70 70.0
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.3e-22 109.4 70 72.9
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.3e-22 109.4 75 74.7
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.6e-22 109.0 84 65.5
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.6e-22 109.0 67 73.1
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.1e-22 108.6 68 73.5
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 2.8e-22 108.2 68 73.5
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 2.8e-22 108.2 68 73.5
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 2.8e-22 108.2 72 77.8
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 3.7e-22 107.8 68 73.5
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 4.8e-22 107.5 68 72.1
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 4.8e-22 107.5 68 72.1
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 4.8e-22 107.5 68 72.1
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 6.3e-22 107.1 72 72.2
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.1e-21 106.3 71 69.0
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.1e-21 106.3 70 70.0
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.4e-21 105.9 69 76.8
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 2.4e-21 105.1 71 67.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.1e-21 104.8 70 67.1
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 4.1e-21 104.4 86 62.8
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 4.1e-21 104.4 74 68.9
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 5.3e-21 104.0 67 70.1
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 5.3e-21 104.0 69 68.1
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 9.0e-21 103.2 72 65.3
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 4.5e-20 100.9 101 56.4
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 3.8e-19 97.8 72 65.3
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 5.0e-19 97.4 59 74.6
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 3.6e-17 91.3 72 68.1
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 6.1e-17 90.5 67 62.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 7.9e-17 90.1 137 41.6
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 7.9e-17 90.1 65 66.2
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 5.1e-16 87.4 69 66.7
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.5e-15 85.1 52 80.8
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.3e-14 82.8 50 80.0
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.2e-14 82.0 51 72.5
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.8e-13 79.0 42 88.1
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.0e-12 75.5 171 32.7
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 4.5e-12 74.3 42 83.3
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.8e-11 71.2 39 82.1
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.5e-11 70.5 42 76.2
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 8.5e-11 70.1 68 52.9
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.4e-10 69.3 42 76.2
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 2.5e-10 68.6 60 55.0
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 2.5e-10 68.6 52 59.6
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 4.2e-10 67.8 40 77.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 7.2e-10 67.0 42 73.8
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 9.4e-10 66.6 41 75.6
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 2.7e-09 65.1 36 80.6
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 6.1e-09 63.9 42 71.4
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.0e-08 63.2 42 66.7
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 2.6e-07 58.5 41 65.9
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.3e-07 58.2 38 65.8
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 4.4e-07 57.8 36 69.4
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 7.4e-07 57.0 31 83.9
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 9.7e-07 56.6 32 81.2
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 1.7e-06 55.8 40 60.0
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 3.7e-06 54.7 45 55.6
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 4.8e-06 54.3 32 81.2
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 8.2e-06 53.5 31 77.4
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 8.2e-06 53.5 37 62.2


User provided reference genes

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