Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 7.3e-107 390.6 198 100.0
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 1.4e-70 270.0 200 75.5
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 3.8e-63 245.4 214 66.4
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 2.1e-61 239.6 210 65.2
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 4.6e-61 238.4 213 64.3
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 4.6e-61 238.4 205 65.9
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 6.0e-61 238.0 201 67.2
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 1.0e-60 237.3 201 67.2
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 1.3e-60 236.9 197 67.5
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 2.3e-60 236.1 207 64.7
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 3.9e-60 235.3 201 65.7
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 6.7e-60 234.6 212 65.1
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.5e-59 233.4 222 63.1
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 5.7e-59 231.5 205 66.8
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 5.7e-59 231.5 205 66.8
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.6e-58 229.9 210 65.2
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 1.6e-58 229.9 205 65.4
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 3.7e-58 228.8 218 61.9
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 3.7e-58 228.8 206 64.1
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.3e-58 228.0 215 62.8
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 8.2e-58 227.6 215 62.3
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 8.2e-58 227.6 200 66.0
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 2.4e-57 226.1 211 65.9
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.1e-57 225.3 213 62.9
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.1e-57 225.3 213 62.9
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 4.1e-57 225.3 215 62.3
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 4.1e-57 225.3 200 65.0
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 4.1e-57 225.3 206 63.6
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 1.2e-56 223.8 210 60.0
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 1.5e-56 223.4 217 62.2
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 2.0e-56 223.0 213 62.4
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 2.0e-56 223.0 207 62.3
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.4e-56 222.2 202 63.4
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 4.5e-56 221.9 212 59.9
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 4.5e-56 221.9 228 57.5
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 5.9e-56 221.5 204 66.2
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 7.6e-56 221.1 224 58.0
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.0e-55 220.7 210 63.3
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 1.7e-55 219.9 201 63.2
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 3.8e-55 218.8 210 60.5
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 3.8e-55 218.8 213 60.6
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 1.1e-54 217.2 211 58.8
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 1.1e-54 217.2 142 81.0
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 1.1e-54 217.2 213 59.2
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 1.1e-54 217.2 206 61.2
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.4e-54 216.9 213 62.4
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 1.9e-54 216.5 206 61.2
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 4.2e-54 215.3 131 85.5
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 4.2e-54 215.3 211 62.1
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 5.5e-54 214.9 200 61.5
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 9.3e-54 214.2 207 61.4
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 2.1e-53 213.0 173 67.6
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 2.7e-53 212.6 215 58.6
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 2.7e-53 212.6 210 61.4
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.5e-53 212.2 225 58.2
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 4.6e-53 211.8 216 59.3
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 6.1e-53 211.5 211 58.8
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 1.0e-52 210.7 199 61.8
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 1.0e-52 210.7 217 58.5
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.0e-52 210.7 224 56.7
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 1.8e-52 209.9 146 76.0
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 3.0e-52 209.1 130 83.1
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 1.5e-51 206.8 224 56.7
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 1.5e-51 206.8 164 70.1
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 1.9e-51 206.5 204 60.3
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 1.9e-51 206.5 147 75.5
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 4.3e-51 205.3 224 57.1
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 7.4e-51 204.5 233 54.9
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 7.4e-51 204.5 131 79.4
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 9.7e-51 204.1 218 56.9
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 9.7e-51 204.1 191 64.4
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 1.3e-50 203.8 258 51.6
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.6e-50 203.4 220 56.4
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 2.2e-50 203.0 210 58.1
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 3.7e-50 202.2 189 63.5
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.3e-50 201.4 221 57.0
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 1.4e-49 200.3 251 51.8
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 1.2e-48 197.2 206 56.3
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 3.4e-48 195.7 208 56.2
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 3.4e-48 195.7 276 46.7
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 4.5e-48 195.3 216 55.1
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 1.3e-47 193.7 199 56.8
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.3e-47 193.7 149 68.5
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 1.7e-47 193.4 143 71.3
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 1.7e-47 193.4 204 57.4
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 2.2e-47 193.0 143 70.6
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 2.2e-47 193.0 143 70.6
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 2.2e-47 193.0 143 70.6
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 2.9e-47 192.6 149 69.8
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 3.8e-47 192.2 148 68.9
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 5.0e-47 191.8 149 67.8
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 5.0e-47 191.8 206 56.3
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 6.5e-47 191.4 206 54.9
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 8.5e-47 191.0 143 69.9
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 8.5e-47 191.0 156 65.4
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.1e-46 190.7 147 68.0
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 1.1e-46 190.7 143 71.3
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.1e-46 190.7 147 69.4
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.1e-46 190.7 184 59.8
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 1.9e-46 189.9 198 58.1
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 3.2e-46 189.1 197 59.9
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 4.2e-46 188.7 187 59.4
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 7.2e-46 188.0 193 60.6
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 9.4e-46 187.6 214 53.3
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 9.4e-46 187.6 133 71.4
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 9.4e-46 187.6 129 76.7
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.2e-45 187.2 120 79.2
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.2e-45 187.2 131 74.0
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.6e-45 185.7 143 69.9
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 6.1e-45 184.9 152 65.8
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 1.0e-44 184.1 200 56.5
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 1.8e-44 183.3 211 53.6
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 3.9e-44 182.2 208 51.0
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 6.7e-44 181.4 284 44.7
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 2.5e-43 179.5 199 55.3
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.7e-42 176.8 131 67.9
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 2.8e-42 176.0 126 70.6
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 5.3e-41 171.8 218 51.8
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 3.8e-39 165.6 194 55.2
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 1.9e-38 163.3 191 54.5
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 1.9e-38 163.3 111 73.9
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 2.5e-38 162.9 124 69.4
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 1.2e-37 160.6 115 72.2
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 1.6e-37 160.2 119 69.7
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.1e-37 159.8 157 58.0
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 3.6e-37 159.1 125 69.6
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 4.7e-37 158.7 160 59.4
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 8.8e-36 154.5 203 49.3
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 2.0e-35 153.3 129 62.0
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 3.3e-35 152.5 176 53.4
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 5.7e-35 151.8 123 65.0
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 1.7e-34 150.2 171 55.0
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 2.8e-34 149.4 131 64.1
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 8.2e-34 147.9 134 61.2
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 1.8e-33 146.7 171 54.4
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 3.5e-32 142.5 133 54.9
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 3.5e-32 142.5 190 50.0
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.7e-31 140.2 136 57.4
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.2e-30 136.0 161 54.0
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.6e-29 133.7 99 73.7
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 4.0e-28 129.0 125 59.2
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.1e-25 120.9 163 52.1
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 3.5e-24 115.9 146 50.0
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 4.5e-24 115.5 132 47.0
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.3e-23 114.0 209 38.8
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 3.6e-21 105.9 62 85.5
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 8.3e-18 94.7 143 39.2
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.4e-17 93.2 88 54.5
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 2.9e-15 86.3 116 40.5
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 4.9e-10 68.9 38 84.2
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 3.8e-07 59.3 75 53.3


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