Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.9e-49 198.7 92 100.0
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 2.1e-48 195.3 92 97.8
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 3.6e-48 194.5 92 96.7
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 1.5e-46 189.1 92 93.5
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 1.3e-45 186.0 92 92.4
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 8.2e-45 183.3 93 91.4
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 2.4e-44 181.8 92 88.0
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 4.1e-44 181.0 92 89.1
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 5.9e-43 177.2 88 89.8
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.7e-42 175.6 92 87.0
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.7e-42 175.6 92 87.0
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 2.2e-42 175.3 92 87.0
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 2.9e-42 174.9 92 87.0
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 6.5e-42 173.7 93 84.9
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 2.5e-41 171.8 89 85.4
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 3.2e-41 171.4 92 85.9
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 5.5e-41 170.6 92 84.8
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 9.4e-41 169.9 84 90.5
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 9.4e-41 169.9 92 82.6
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 9.4e-41 169.9 92 82.6
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 1.2e-40 169.5 84 90.5
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 1.6e-40 169.1 92 82.6
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 2.1e-40 168.7 87 87.4
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 2.1e-40 168.7 87 87.4
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 2.1e-40 168.7 92 84.8
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 2.7e-40 168.3 84 89.3
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 2.7e-40 168.3 84 89.3
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 2.7e-40 168.3 84 89.3
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 2.7e-40 168.3 92 83.7
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 3.6e-40 167.9 89 83.1
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 4.7e-40 167.5 85 87.1
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 4.7e-40 167.5 90 84.4
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 6.1e-40 167.2 87 86.2
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.0e-39 166.4 93 80.6
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 1.8e-39 165.6 92 80.4
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 3.0e-39 164.9 84 86.9
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 3.9e-39 164.5 84 89.3
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 3.9e-39 164.5 85 84.7
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 5.2e-39 164.1 84 86.9
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 6.7e-39 163.7 89 82.0
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 6.7e-39 163.7 92 82.6
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 8.8e-39 163.3 85 84.7
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 8.8e-39 163.3 85 84.7
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 8.8e-39 163.3 85 84.7
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 8.8e-39 163.3 85 84.7
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 8.8e-39 163.3 87 82.8
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 2.6e-38 161.8 84 85.7
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 84.5
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.7e-38 160.6 92 77.2
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 7.4e-38 160.2 84 83.3
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 7.4e-38 160.2 84 85.7
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 1.3e-37 159.5 84 84.5
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.3e-37 159.5 92 76.1
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 81.0
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 1.7e-37 159.1 81 86.4
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 83.3
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 82.1
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 82.1
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 82.1
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 2.2e-37 158.7 84 82.1
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 2.8e-37 158.3 87 79.3
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 2.8e-37 158.3 85 82.4
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 4.8e-37 157.5 84 81.0
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 8.2e-37 156.8 85 82.4
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 8.2e-37 156.8 85 82.4
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 1.4e-36 156.0 84 79.8
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.8e-36 155.6 84 78.6
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.4e-36 155.2 81 84.0
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 3.1e-36 154.8 84 78.6
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 4.1e-36 154.5 91 74.7
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 4.1e-36 154.5 90 75.6
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 7.0e-36 153.7 83 79.5
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 9.1e-36 153.3 90 74.4
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 9.1e-36 153.3 90 74.4
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 9.1e-36 153.3 83 78.3
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 9.1e-36 153.3 84 82.1
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 9.1e-36 153.3 84 78.6
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 9.1e-36 153.3 84 78.6
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 1.2e-35 152.9 84 81.0
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 1.6e-35 152.5 89 75.3
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 1.6e-35 152.5 84 79.8
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 2.0e-35 152.1 92 73.9
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 4.5e-35 151.0 83 78.3
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 4.5e-35 151.0 88 76.1
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 4.5e-35 151.0 88 75.0
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 5.9e-35 150.6 83 77.1
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 84 78.6
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 84 78.6
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 84 78.6
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 84 78.6
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 7.7e-35 150.2 84 78.6
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.0e-34 149.8 84 77.4
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.0e-34 149.8 84 77.4
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.7e-34 149.1 84 77.4
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 2.2e-34 148.7 84 77.4
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 2.2e-34 148.7 84 77.4
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 2.2e-34 148.7 84 77.4
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 2.2e-34 148.7 84 77.4
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 5.0e-34 147.5 88 73.9
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.1e-33 146.4 80 81.2
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.9e-33 145.6 87 74.7
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 2.5e-33 145.2 76 84.2
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 1.6e-32 142.5 90 67.8
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 3.6e-32 141.4 91 68.1
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 4.7e-32 141.0 91 69.2
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 2.3e-31 138.7 87 70.1
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 8.8e-31 136.7 87 69.0
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 2.0e-30 135.6 91 70.3
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 3.3e-30 134.8 86 69.8
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 3.3e-30 134.8 86 69.8
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 4.4e-30 134.4 84 66.7
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 2.2e-29 132.1 87 70.1
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 2.2e-29 132.1 89 65.2
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 9.1e-28 126.7 84 66.7
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 2.0e-27 125.6 71 71.8
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 8.5e-26 120.2 84 61.9
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 3.7e-21 104.8 70 65.7
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 3.7e-21 104.8 70 65.7
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 4.8e-21 104.4 88 47.7
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 7.7e-19 97.1 56 73.2
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 1.3e-18 96.3 82 46.3
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 1.2e-16 89.7 78 48.7
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 5.7e-14 80.9 78 42.3
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 2.2e-13 79.0 80 42.5
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 2.2e-13 79.0 42 76.2
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 2.9e-10 68.6 84 47.6
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.5e-09 66.2 41 75.6
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 1.8e-07 59.3 56 48.2
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 1.2e-06 56.6 36 69.4
Zm00001eb053240 Zea mays HOM05D005988 ORTHO05D007392 2.0e-06 55.8 36 66.7


User provided reference genes

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