Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 2.6e-164 582.0 304 100.0
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 9.7e-151 537.0 303 93.7
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 5.5e-138 494.6 304 84.9
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 1.5e-122 443.4 331 73.4
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 2.0e-119 433.0 311 73.3
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 9.4e-114 414.1 291 74.2
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.1e-113 412.9 313 70.0
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 5.2e-112 408.3 306 71.9
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 2.0e-111 406.4 304 72.4
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 2.6e-111 406.0 308 70.8
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 8.3e-110 401.0 304 71.7
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.3e-104 382.9 273 72.2
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.5e-103 380.2 274 72.3
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 2.0e-103 379.8 286 70.6
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 3.4e-103 379.0 293 70.0
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.3e-102 377.1 286 69.2
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 2.2e-102 376.3 274 70.8
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.8e-102 375.9 273 71.1
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 4.5e-100 368.6 286 71.0
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 2.9e-99 365.9 291 65.6
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 2.5e-98 362.8 281 68.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 3.3e-98 362.5 284 66.5
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 7.3e-98 361.3 283 70.0
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 9.5e-98 360.9 290 65.9
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 1.2e-97 360.5 303 64.0
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 5.2e-96 355.1 302 64.9
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 6.8e-96 354.8 286 65.0
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 1.5e-95 353.6 261 70.5
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 1.5e-95 353.6 257 70.4
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 2.0e-95 353.2 287 67.2
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 9.8e-95 350.9 301 63.5
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 1.3e-94 350.5 257 69.3
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 8.3e-94 347.8 304 63.8
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 8.3e-94 347.8 264 69.7
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.9e-93 346.7 259 70.3
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.9e-93 346.7 323 61.9
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 3.2e-93 345.9 258 70.9
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 7.0e-93 344.7 264 70.1
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 1.2e-92 344.0 260 68.5
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.6e-92 343.6 279 68.1
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.5e-92 342.4 258 69.0
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 6.0e-92 341.7 308 61.0
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 3.0e-91 339.3 251 71.7
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.6e-89 333.6 293 60.4
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 2.1e-89 333.2 284 61.6
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 2.8e-89 332.8 260 65.4
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 4.7e-89 332.0 270 64.4
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 6.2e-89 331.6 252 69.0
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.4e-88 330.5 300 61.3
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.4e-88 330.5 213 76.5
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 2.3e-88 329.7 260 65.0
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 5.2e-88 328.6 262 64.9
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 5.2e-88 328.6 262 64.9
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 6.8e-88 328.2 286 61.9
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 6.8e-88 328.2 293 62.1
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 8.9e-88 327.8 286 61.9
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 8.9e-88 327.8 262 64.9
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 3.4e-87 325.9 263 65.0
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 4.4e-87 325.5 303 60.4
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.2e-86 323.2 262 64.5
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 8.3e-86 321.2 292 61.0
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.4e-85 319.7 265 65.7
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 4.1e-85 318.9 289 60.2
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 3.5e-84 315.8 298 59.4
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.7e-83 313.5 298 58.4
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 2.3e-83 313.2 291 60.1
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.0e-83 312.8 309 56.6
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.0e-83 312.8 271 63.1
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 3.9e-83 312.4 226 71.2
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 3.9e-83 312.4 283 60.4
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 5.1e-83 312.0 272 61.0
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 8.6e-83 311.2 266 62.8
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 8.6e-83 311.2 294 59.2
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.3e-82 309.3 304 55.9
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 4.3e-82 308.9 255 64.3
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.6e-81 307.0 251 63.7
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 3.6e-81 305.8 270 60.0
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 3.6e-81 305.8 279 59.5
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 1.4e-80 303.9 305 57.4
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 5.2e-80 302.0 257 64.6
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 1.7e-78 297.0 343 52.8
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 5.4e-77 292.0 210 72.4
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.1e-76 290.0 285 57.2
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.2e-73 280.8 275 58.2
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 2.1e-73 280.0 283 60.1
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 6.2e-73 278.5 293 58.0
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.4e-72 277.3 254 62.6
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 1.5e-71 273.9 258 57.4
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 2.9e-70 269.6 252 58.3
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 8.4e-70 268.1 228 64.5
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.1e-68 263.5 221 64.7
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 6.0e-68 261.9 222 65.3
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.1e-66 257.7 188 72.3
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 2.6e-63 246.5 308 48.4
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.8e-57 226.5 219 58.4
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.2e-52 211.1 278 46.4
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 3.0e-51 206.5 148 73.6
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 5.1e-51 205.7 249 47.0
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 3.4e-47 193.0 210 50.5
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.0e-46 191.4 189 58.7
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 5.8e-39 165.6 270 38.5
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 3.2e-37 159.8 141 62.4
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 5.5e-37 159.1 132 63.6
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 1.6e-36 157.5 118 70.3
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 1.3e-35 154.5 266 39.5
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.5e-34 150.2 170 47.6
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 7.4e-34 148.7 236 41.5
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.6e-33 147.5 114 65.8
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 2.2e-33 147.1 109 65.1
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 3.4e-31 139.8 121 62.8
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.7e-30 137.5 130 53.8
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 9.4e-29 131.7 117 59.8
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 2.1e-28 130.6 117 59.8
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 5.7e-26 122.5 209 41.6
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.0e-22 111.7 93 59.1
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.9e-21 107.5 93 60.2
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 7.2e-21 105.5 77 67.5
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 3.3e-10 70.1 46 67.4
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.1e-08 65.1 115 40.9
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 7.0e-08 62.4 60 51.7
FAN16G0199 Fragaria x ananassa HOM05D000780 ORTHO05D210745 6.5e-06 55.8 36 61.1


User provided reference genes

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