Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 2.8e-137 491.9 242 100.0
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.6e-124 449.5 240 91.2
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.8e-115 419.5 245 84.1
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 6.4e-113 411.0 246 82.9
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.1e-104 383.6 238 77.7
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.3e-102 376.7 215 81.9
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 8.6e-102 374.0 222 80.2
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 8.6e-102 374.0 222 80.2
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 8.1e-100 367.5 237 74.7
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 3.1e-99 365.5 237 74.3
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 6.8e-99 364.4 229 76.4
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 2.0e-98 362.8 239 74.1
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 5.8e-98 361.3 215 78.6
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 7.6e-98 360.9 239 72.4
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 1.7e-97 359.8 217 77.9
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 3.7e-97 358.6 244 70.1
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 6.4e-97 357.8 240 71.7
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 6.4e-97 357.8 239 71.1
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.4e-96 356.7 233 73.0
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.4e-96 356.7 236 72.5
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.4e-96 356.7 222 75.2
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 2.4e-96 355.9 215 76.7
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 3.2e-96 355.5 215 78.6
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 9.2e-96 354.0 217 76.0
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.2e-95 353.6 225 74.7
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.6e-95 353.2 215 76.3
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 3.5e-95 352.1 215 76.3
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 3.5e-95 352.1 214 76.2
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.5e-95 352.1 217 75.6
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 6.0e-95 351.3 217 75.1
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 6.0e-95 351.3 238 70.2
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 7.8e-95 350.9 214 76.6
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.0e-94 350.5 215 75.8
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.3e-94 350.1 217 74.7
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.7e-94 349.7 217 74.7
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.0e-94 349.0 214 76.6
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 3.0e-94 349.0 245 69.4
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 5.1e-94 348.2 219 75.8
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 5.1e-94 348.2 224 72.8
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 6.6e-94 347.8 230 71.3
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.6e-94 347.8 219 75.8
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 6.6e-94 347.8 214 74.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 8.6e-94 347.4 217 75.1
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.1e-93 347.1 217 74.7
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.1e-93 347.1 217 74.7
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 4.3e-93 345.1 236 70.3
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 4.3e-93 345.1 228 71.5
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 7.3e-93 344.4 241 69.7
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 7.3e-93 344.4 216 73.6
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 9.6e-93 344.0 215 74.4
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.2e-92 343.6 223 73.5
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.2e-92 343.6 217 74.7
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.2e-92 343.6 239 67.4
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 1.2e-92 343.6 217 73.7
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 2.1e-92 342.8 215 74.4
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 6.2e-92 341.3 214 73.4
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 6.2e-92 341.3 217 74.7
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 8.1e-92 340.9 214 74.8
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.1e-91 340.5 215 74.0
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 8.9e-91 337.4 217 72.8
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.2e-90 337.0 215 71.2
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.6e-90 335.9 214 73.4
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 3.4e-90 335.5 217 73.3
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 3.8e-89 332.0 236 67.4
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 4.9e-89 331.6 214 69.6
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.9e-89 331.6 214 69.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 4.9e-89 331.6 214 69.6
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 4.9e-89 331.6 224 70.5
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 6.4e-89 331.3 215 69.8
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 6.4e-89 331.3 228 68.9
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 6.4e-89 331.3 212 73.1
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 8.4e-89 330.9 215 68.8
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 1.4e-88 330.1 246 67.1
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.9e-88 329.7 223 66.4
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.4e-88 329.3 231 71.0
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.4e-88 329.3 241 68.5
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 5.4e-88 328.2 222 70.7
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 9.3e-88 327.4 216 69.4
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.2e-87 327.0 215 67.9
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.2e-87 327.0 225 65.8
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 1.2e-87 327.0 215 67.9
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.6e-87 326.6 215 67.9
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.6e-87 326.6 215 67.9
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 1.6e-87 326.6 215 67.4
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 2.1e-87 326.2 226 65.0
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 3.5e-87 325.5 215 67.4
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 4.6e-87 325.1 215 67.4
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 4.6e-87 325.1 215 67.4
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 6.0e-87 324.7 215 66.0
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.3e-86 323.6 215 68.4
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 5.1e-86 321.6 209 71.8
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 7.3e-85 317.8 222 69.4
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 1.3e-84 317.0 215 67.4
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 4.0e-83 312.0 304 53.9
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.5e-82 310.1 266 59.4
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.0e-82 309.7 215 66.5
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 3.4e-82 308.9 224 66.5
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.3e-76 290.4 207 67.6
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.1e-76 289.7 200 68.0
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 2.0e-74 283.1 169 79.3
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 5.8e-74 281.6 165 80.0
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 6.0e-71 271.6 164 76.2
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.1e-70 268.5 220 60.5
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 2.2e-65 253.1 222 55.0
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.9e-64 250.0 217 55.8
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 6.2e-60 235.0 189 63.5
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 6.9e-59 231.5 220 50.9
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.5e-53 213.0 139 71.9
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.2e-47 194.1 131 69.5
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 1.5e-45 187.2 221 47.1
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 2.2e-44 183.3 101 80.2
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 6.5e-41 171.8 210 45.2
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 6.3e-36 155.2 104 69.2
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.0e-34 150.2 213 41.3
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 3.2e-32 142.9 143 53.8
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 3.2e-32 142.9 143 53.8
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 2.1e-31 140.2 208 39.9
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 3.0e-30 136.3 83 74.7
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.3e-29 132.9 82 74.4
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.3e-29 132.9 82 74.4
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 1.8e-27 127.1 95 66.3
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 9.1e-27 124.8 86 69.8
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.2e-25 120.2 98 62.2
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.0e-22 111.3 62 80.6
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-21 107.1 79 65.8
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 2.4e-19 100.1 82 61.0
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 8.5e-17 91.7 66 65.2
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 9.4e-16 88.2 186 33.9
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.7e-15 86.7 175 31.4
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 6.1e-15 85.5 179 34.6
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 8.8e-14 81.6 52 69.2
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 2.0e-13 80.5 61 63.9
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 7.0e-11 72.0 41 80.5


User provided reference genes

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