Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.3e-255 885.9 449 100.0
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 1.0e-209 733.4 447 84.1
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 7.5e-192 674.1 433 81.3
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 1.9e-163 579.7 458 67.2
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 2.8e-162 575.9 415 71.3
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 3.1e-161 572.4 451 69.0
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 3.4e-160 568.9 449 67.5
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 7.5e-160 567.8 449 67.3
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.3e-159 567.0 451 67.0
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 3.7e-159 565.5 460 64.8
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.1e-158 563.9 449 67.7
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 3.2e-158 562.4 459 65.6
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.3e-156 556.2 440 65.2
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.6e-156 554.7 441 65.5
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 6.6e-156 554.7 430 68.1
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 1.9e-155 553.1 458 66.6
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.5e-155 552.7 440 64.8
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 3.3e-155 552.4 448 65.0
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 4.3e-155 552.0 450 64.2
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 9.5e-155 550.8 458 66.4
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 2.4e-153 546.2 432 65.0
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 3.1e-153 545.8 442 64.7
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 3.4e-152 542.3 447 64.4
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 8.4e-151 537.7 432 65.3
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.4e-150 537.0 459 62.7
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 1.9e-150 536.6 447 64.0
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 1.2e-149 533.9 457 64.6
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 4.6e-149 531.9 447 63.8
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.3e-148 529.6 391 68.3
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 2.3e-148 529.6 450 62.2
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 3.0e-148 529.3 454 62.8
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.9e-148 528.9 387 68.5
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 1.5e-147 526.9 446 61.2
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 1.5e-147 526.9 456 61.8
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 3.3e-147 525.8 453 61.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 6.2e-146 521.5 460 61.3
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.4e-145 520.4 462 62.1
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 4.0e-145 518.8 459 62.5
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 3.4e-144 515.8 428 63.8
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 4.0e-137 492.3 451 61.0
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 3.8e-135 485.7 446 59.4
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 8.4e-135 484.6 443 59.8
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 8.4e-135 484.6 430 61.4
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 3.2e-134 482.6 414 62.3
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.7e-133 479.6 453 58.1
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 5.1e-132 475.3 429 58.3
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 8.7e-132 474.6 414 59.4
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 3.3e-131 472.6 452 59.3
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 5.6e-131 471.9 410 61.0
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 5.6e-131 471.9 394 61.9
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 7.4e-131 471.5 446 58.3
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 7.4e-131 471.5 452 58.6
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 9.6e-131 471.1 445 58.9
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.6e-130 470.3 450 57.6
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 2.1e-130 469.9 452 58.8
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 2.1e-130 469.9 416 57.7
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 4.8e-130 468.8 452 58.8
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 4.8e-130 468.8 452 58.8
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.2e-130 468.4 446 57.6
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 8.1e-130 468.0 446 57.6
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 8.1e-130 468.0 451 55.2
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.1e-129 467.6 457 58.0
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.8e-129 466.8 395 61.0
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.8e-129 466.8 454 58.4
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 7.6e-128 461.5 409 59.7
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 1.9e-126 456.8 434 58.5
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 3.2e-126 456.1 451 57.6
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.6e-125 453.8 328 70.1
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 3.5e-125 452.6 346 67.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 3.5e-125 452.6 454 56.2
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.3e-124 450.7 453 55.0
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 1.8e-124 450.3 464 53.9
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 1.1e-123 447.6 455 53.6
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.1e-123 447.6 447 54.6
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.5e-123 446.4 467 54.8
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 2.5e-123 446.4 450 55.8
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 4.3e-123 445.7 444 54.3
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 5.6e-123 445.3 443 56.4
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 2.1e-122 443.4 426 57.7
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 6.2e-122 441.8 453 54.1
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 8.2e-122 441.4 456 54.6
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 8.2e-122 441.4 413 57.4
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 5.3e-121 438.7 461 54.0
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 5.3e-121 438.7 458 55.0
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 5.3e-121 438.7 389 59.1
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 1.0e-119 434.5 394 56.1
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 2.2e-119 433.3 400 58.0
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 2.2e-119 433.3 402 58.2
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 8.4e-119 431.4 459 54.2
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 8.4e-119 431.4 459 54.2
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 4.6e-117 425.6 456 55.3
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 6.0e-117 425.2 453 56.7
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 6.7e-116 421.8 377 59.4
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.6e-114 417.2 386 57.8
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 4.1e-113 412.5 342 64.0
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 2.0e-112 410.2 456 51.5
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 2.6e-112 409.8 458 50.0
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 5.9e-112 408.7 454 51.8
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 7.7e-112 408.3 382 56.8
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 3.9e-108 396.0 251 81.3
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.5e-107 394.0 395 54.7
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 2.8e-106 389.8 425 53.6
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 3.7e-106 389.4 345 59.1
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 9.4e-102 374.8 439 50.6
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.1e-101 373.6 363 55.1
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 2.0e-96 357.1 286 65.7
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 2.5e-94 350.1 333 58.9
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 3.8e-87 326.2 364 52.5
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 1.3e-82 311.2 228 71.5
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.6e-80 304.3 343 52.8
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 5.9e-80 302.4 418 44.3
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 5.7e-75 285.8 390 45.1
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.3e-74 284.6 466 44.4
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 1.7e-71 274.2 480 41.0
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 2.5e-70 270.4 315 54.0
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.3e-68 263.8 224 62.1
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 9.5e-62 241.9 218 56.4
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.9e-54 217.6 391 36.3
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.3e-54 216.5 396 35.6
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.6e-51 207.2 398 35.7
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 4.4e-43 179.9 423 33.8
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 1.5e-27 128.3 124 55.6
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 1.6e-24 118.2 420 30.0
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 1.7e-23 114.8 75 74.7
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.4e-20 104.4 277 30.7
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 1.5e-19 101.7 173 37.0
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 3.3e-14 84.0 207 30.0
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 5.6e-14 83.2 429 25.2
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 5.8e-11 73.2 82 48.8
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.0e-10 72.4 157 31.8


User provided reference genes

Program Settings