Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001692 Phaseolus vulgaris HOM05D007032 ORTHO05D008777 4.9e-67 257.7 132 100.0
Phvul.001G110800 Phaseolus vulgaris HOM05D007032 ORTHO05D008777 8.7e-56 220.3 142 83.8
VMungo1383G0477 Vigna mungo HOM05D007032 ORTHO05D008777 1.2e-49 199.9 142 75.4
Glyma.19G112100 Glycine max HOM05D007032 ORTHO05D008777 1.4e-37 159.8 141 65.2
Glyma.16G041000 Glycine max HOM05D007032 ORTHO05D008777 4.2e-34 148.3 141 61.0
Lalb_Chr22g0359131 Lupinus albus HOM05D007032 ORTHO05D008777 4.2e-26 121.7 150 54.7
Lj1g0006283 Lotus japonicus HOM05D007032 ORTHO05D008777 7.4e-23 110.9 147 51.7
Ca_08264_v3 Cicer arietinum L. HOM05D007032 ORTHO05D008777 1.5e-20 103.2 144 46.5
Medtr7g085600 Medicago truncatula HOM05D007032 ORTHO05D008777 3.6e-17 92.0 142 45.1
arahy.Tifrunner.gnm1.ann1.U2PEBB Arachis hypogaea HOM05D007032 ORTHO05D008777 1.4e-16 90.1 154 44.8
arahy.Tifrunner.gnm1.ann1.TEV0AS Arachis hypogaea HOM05D007032 ORTHO05D008777 3.0e-16 89.0 152 45.4
Cfa016444 Carpinus fangiana HOM05D007032 ORTHO05D008777 5.7e-15 84.7 159 40.9
Aa31LG11G11460 Aethionema arabicum HOM05D007032 ORTHO05D008777 2.8e-14 82.4 101 48.5
Haze_19421 Corylus avellana HOM05D007032 ORTHO05D008777 3.7e-14 82.0 153 39.2
COL.COLO4_13594 Corchorus olitorius HOM05D007032 ORTHO05D008777 4.8e-14 81.6 158 40.5
Cpa.g.sc51.117 Carica papaya HOM05D007032 ORTHO05D008777 2.4e-13 79.3 161 37.9
TPR.G5887 Trifolium pratense HOM05D007032 ORTHO05D008777 5.3e-13 78.2 119 45.4
THA.LOC104820772 Tarenaya hassleriana HOM05D007032 ORTHO05D008777 7.0e-13 77.8 157 39.5
Duzib177G0078 Durio zibethinus HOM05D007032 ORTHO05D008777 9.1e-13 77.4 167 37.7
Duzib177G0665 Durio zibethinus HOM05D007032 ORTHO05D008777 9.1e-13 77.4 167 37.7
TWI34G0430 Tripterygium wilfordii HOM05D007032 ORTHO05D008777 1.2e-12 77.0 139 41.7
MD12G1003800 Malus domestica HOM05D007032 ORTHO05D008777 2.0e-12 76.3 152 40.1
Psat0s1971g0040 Pisum sativum HOM05D007032 ORTHO05D008777 2.0e-12 76.3 90 51.1
Prupe.7G004300 Prunus persica HOM05D007032 ORTHO05D008777 2.0e-12 76.3 96 49.0
RcHm_v2.0_Chr3g0497071 Rosa chinensis HOM05D007032 ORTHO05D008777 2.0e-12 76.3 104 49.0
Thecc.05G294800 Theobroma cacao HOM05D007032 ORTHO05D008777 4.5e-12 75.1 160 37.5
MELO3C026886.2 Cucumis melo HOM05D007032 ORTHO05D008777 3.8e-11 72.0 155 36.8
Manes.09G141200 Manihot esculenta HOM05D007032 ORTHO05D008777 3.8e-11 72.0 160 39.4
Actinidia38613 Actinidia chinensis HOM05D007032 ORTHO05D008777 5.0e-11 71.6 145 37.2
Lj1g0005860 Lotus japonicus HOM05D007032 ORTHO05D236081 6.5e-11 71.2 71 64.8
TAR623G0513 Trochodendron aralioides HOM05D007032 ORTHO05D008777 1.5e-10 70.1 150 39.3
AT5G18140 Arabidopsis thaliana HOM05D007032 ORTHO05D008777 2.5e-10 69.3 167 36.5
CsaV3_3G043260 Cucumis sativus L. HOM05D007032 ORTHO05D008777 3.2e-10 68.9 155 36.8
GSVIVG01033405001 Vitis vinifera HOM05D007032 ORTHO05D008777 4.2e-10 68.6 98 42.9
Atru.chr2.1387 Acer truncatum HOM05D007032 ORTHO05D008777 5.5e-10 68.2 106 44.3
Actinidia17303 Actinidia chinensis HOM05D007032 ORTHO05D008777 5.5e-10 68.2 145 37.2
FAN19G2553 Fragaria x ananassa HOM05D007032 ORTHO05D008777 5.5e-10 68.2 117 41.9
Ciclev10021147m.g Citrus clementina HOM05D007032 ORTHO05D008777 2.1e-09 66.2 95 45.3
FvH4_1g28130 Fragaria vesca HOM05D007032 ORTHO05D008777 2.1e-09 66.2 89 46.1
Nn7g35853 Nelumbo nucifera HOM05D007032 ORTHO05D008777 2.1e-09 66.2 143 37.8
Aqoxy1G00484 Aquilegia oxysepala HOM05D007032 ORTHO05D008777 3.6e-09 65.5 96 42.7
CSS0032159 Camellia sinensis var. sinensis HOM05D007032 ORTHO05D008777 3.6e-09 65.5 156 36.5
Sed0015080 Sechium edule HOM05D007032 ORTHO05D008777 4.7e-09 65.1 159 37.7
AL6G29340 Arabidopsis lyrata HOM05D007032 ORTHO05D008777 6.1e-09 64.7 90 46.7
BcaB08g36702 Brassica carinata HOM05D007032 ORTHO05D008777 6.1e-09 64.7 127 40.9
Gohir.D13G177900 Gossypium hirsutum HOM05D007032 ORTHO05D008777 6.1e-09 64.7 163 36.8
Carub.0006s1643 Capsella rubella HOM05D007032 ORTHO05D008777 8.0e-09 64.3 93 46.2
CiPaw.10G001100 Carya illinoinensis HOM05D007032 ORTHO05D008777 1.0e-08 63.9 136 39.0
Dinv37016 Davidia involucrata HOM05D007032 ORTHO05D008777 1.0e-08 63.9 152 36.2
FAN26G0126 Fragaria x ananassa HOM05D007032 ORTHO05D008777 1.4e-08 63.5 103 41.7
Gohir.A13G172000 Gossypium hirsutum HOM05D007032 ORTHO05D008777 1.4e-08 63.5 115 40.0
Gorai.013G203200 Gossypium raimondii HOM05D007032 ORTHO05D008777 1.4e-08 63.5 115 40.0
PGR142G4364 Punica granatum HOM05D007032 ORTHO05D008777 1.4e-08 63.5 118 39.0
A10p21360 Brassica napus HOM05D007032 ORTHO05D008777 2.3e-08 62.8 95 45.3
BraA10t44199Z Brassica rapa HOM05D007032 ORTHO05D008777 2.3e-08 62.8 95 45.3
Thhalv10014046m.g Eutrema salsugineum HOM05D007032 ORTHO05D008777 3.0e-08 62.4 111 42.3
Ah.04g153180 Amaranthus hybridus HOM05D002059 ORTHO05D002210 4.0e-08 62.0 82 46.3
BolC9t58727H Brassica oleracea HOM05D007032 ORTHO05D008777 4.0e-08 62.0 96 43.8
C08p30760 Brassica napus HOM05D004126 ORTHO05D004818 5.2e-08 61.6 86 46.5
ClCG10G013370 Citrullus lanatus HOM05D007032 ORTHO05D008777 5.2e-08 61.6 170 33.5
C09p58830 Brassica napus HOM05D007032 ORTHO05D008777 1.2e-07 60.5 101 44.6
Sc23g0006440 Simmondsia chinensis HOM05D007032 ORTHO05D008777 1.5e-07 60.1 147 36.7
CANSAT78G2258 Cannabis sativa HOM05D007032 ORTHO05D008777 2.6e-07 59.3 93 39.8
MBI04_g38346_MAGBIO Magnolia biondii HOM05D007032 ORTHO05D008777 2.6e-07 59.3 92 42.4
CDE10G0774 Ceratophyllum demersum HOM05D007032 ORTHO05D008777 3.3e-07 58.9 109 39.4
Nitab4.5_0002769g0070 Nicotiana tabacum HOM05D007032 ORTHO05D008777 3.3e-07 58.9 149 32.2
Potri.013G058100 Populus trichocarpa HOM05D007032 ORTHO05D008777 3.3e-07 58.9 96 40.6
Sabra19G0042800 Salix brachista HOM05D007032 ORTHO05D008777 3.3e-07 58.9 98 41.8
Sopen10g029210 Solanum pennellii HOM05D007032 ORTHO05D008777 4.4e-07 58.5 150 33.3
Eucgr.K01499 Eucalyptus grandis HOM05D007032 ORTHO05D008777 7.5e-07 57.8 144 36.1
Nitab4.5_0004844g0030 Nicotiana tabacum HOM05D007032 ORTHO05D008777 1.3e-06 57.0 150 32.0
Sp6g26170 Schrenkiella parvula HOM05D007032 ORTHO05D008777 1.3e-06 57.0 95 42.1
Solyc10g078560.3 Solanum lycopersicum HOM05D007032 ORTHO05D008777 1.3e-06 57.0 150 32.7
Potri.019G035100 Populus trichocarpa HOM05D007032 ORTHO05D008777 1.7e-06 56.6 95 41.1
vmacro09138 Vaccinium macrocarpon HOM05D007032 ORTHO05D008777 2.2e-06 56.2 156 33.3
PGSC0003DMG400008355 Solanum tuberosum HOM05D007032 ORTHO05D008777 2.8e-06 55.8 151 32.5
PSO339G2173 Papaver somniferum HOM05D007032 ORTHO05D008777 3.7e-06 55.5 112 39.3
Rhsim04G0088600 Rhododendron simsii HOM05D007032 ORTHO05D008777 3.7e-06 55.5 84 51.2


User provided reference genes

Program Settings