Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.4e-46 188.0 93 100.0
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.5e-41 171.8 92 92.4
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 6.2e-32 140.6 83 83.1
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 2.6e-30 135.2 83 80.7
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 2.6e-30 135.2 83 78.3
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 7.5e-30 133.7 83 78.3
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 1.3e-29 132.9 82 79.3
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.3e-29 132.9 82 79.3
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.7e-29 132.5 83 79.5
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 6.4e-29 130.6 90 72.2
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.4e-28 129.4 90 70.0
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 9.2e-28 126.7 85 71.8
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 9.2e-28 126.7 88 68.2
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 1.6e-27 125.9 88 69.3
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 6.0e-27 124.0 80 72.5
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 1.0e-26 123.2 87 69.0
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.3e-26 122.9 89 68.5
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.3e-26 122.1 80 73.8
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.3e-26 122.1 80 73.8
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 3.0e-26 121.7 80 73.8
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 5.1e-26 120.9 87 67.8
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 6.6e-26 120.6 88 65.9
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.1e-25 119.8 87 66.7
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.1e-25 119.8 87 66.7
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.5e-25 119.4 87 66.7
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 1.9e-25 119.0 80 72.5
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.9e-25 119.0 87 66.7
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 2.5e-25 118.6 87 65.5
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 2.5e-25 118.6 88 63.6
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 3.3e-25 118.2 87 66.7
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 3.3e-25 118.2 87 64.4
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 4.3e-25 117.9 87 66.7
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 5.6e-25 117.5 86 66.3
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 5.6e-25 117.5 87 65.5
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 5.6e-25 117.5 80 71.2
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 7.3e-25 117.1 87 65.5
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 7.3e-25 117.1 87 65.5
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 7.3e-25 117.1 79 72.2
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 7.3e-25 117.1 86 66.3
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 7.3e-25 117.1 80 71.2
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 9.5e-25 116.7 88 62.5
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 9.5e-25 116.7 87 64.4
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.5e-25 116.7 87 64.4
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.2e-24 116.3 81 71.6
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.2e-24 116.3 79 73.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.6e-24 115.9 80 70.0
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.6e-24 115.9 87 67.8
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.6e-24 115.9 79 73.4
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.6e-24 115.9 80 71.2
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.1e-24 115.5 87 65.5
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.1e-24 115.5 80 68.8
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 2.8e-24 115.2 81 70.4
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 3.6e-24 114.8 87 64.4
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 4.7e-24 114.4 81 70.4
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 4.7e-24 114.4 87 64.4
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 4.7e-24 114.4 80 70.0
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 4.7e-24 114.4 81 70.4
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 6.2e-24 114.0 87 64.4
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 6.2e-24 114.0 87 64.4
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 6.2e-24 114.0 80 67.5
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 6.2e-24 114.0 87 63.2
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 8.1e-24 113.6 82 67.1
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 8.1e-24 113.6 79 72.2
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 8.1e-24 113.6 141 49.6
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.1e-23 113.2 87 62.1
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.1e-23 113.2 80 70.0
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.1e-23 113.2 80 72.5
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.8e-23 112.5 87 60.9
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.3e-23 112.1 92 58.7
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 2.3e-23 112.1 87 60.9
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.0e-23 111.3 91 59.3
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 5.2e-23 110.9 96 56.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 5.2e-23 110.9 80 68.8
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 6.8e-23 110.5 87 60.9
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.8e-23 110.5 87 60.9
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 6.8e-23 110.5 86 66.3
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 8.9e-23 110.2 87 60.9
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.2e-22 109.8 87 60.9
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.0e-22 109.0 81 67.9
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 3.4e-22 108.2 81 67.9
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 4.4e-22 107.8 80 66.2
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 5.8e-22 107.5 87 59.8
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 5.8e-22 107.5 78 64.1
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 7.6e-22 107.1 80 66.2
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 9.9e-22 106.7 80 66.2
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 2.9e-21 105.1 79 63.3
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 2.9e-21 105.1 92 58.7
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 2.4e-20 102.1 83 63.9
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 4.6e-19 97.8 80 58.8
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.7e-18 95.9 106 50.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.3e-18 95.5 87 54.0
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.3e-18 95.5 89 49.4
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.8e-16 88.6 63 66.7
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 4.7e-16 87.8 82 50.0
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 3.1e-15 85.1 85 52.9
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 5.2e-15 84.3 63 63.5
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 8.9e-15 83.6 56 67.9
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 4.4e-14 81.3 61 63.9
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 4.4e-14 81.3 55 69.1
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 5.8e-14 80.9 61 62.3
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 1.3e-13 79.7 68 54.4
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.7e-13 79.3 81 51.9
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.4e-12 75.5 51 72.5
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 7.1e-12 73.9 58 62.1
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 2.1e-11 72.4 98 44.9
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.0e-11 70.9 64 51.6
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.0e-10 70.1 66 47.0
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 3.4e-06 55.1 46 52.2
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 3.4e-06 55.1 89 36.0


User provided reference genes

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