Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 4.0e-60 234.6 119 100.0
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 3.1e-44 181.8 121 79.3
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 4.0e-44 181.4 118 78.0
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 6.9e-44 180.6 121 77.7
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 5.1e-39 164.5 119 72.3
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 2.1e-37 159.1 119 69.7
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 8.1e-37 157.1 119 69.7
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 1.1e-36 156.8 121 66.9
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 1.0e-34 150.2 117 64.1
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 7.1e-33 144.1 119 58.8
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 1.6e-32 142.9 119 63.9
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 3.5e-32 141.7 119 63.0
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 6.0e-32 141.0 119 64.7
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 1.0e-31 140.2 117 58.1
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 1.3e-31 139.8 117 59.0
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 2.3e-31 139.0 118 59.3
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 8.7e-31 137.1 117 57.3
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 4.3e-30 134.8 117 56.4
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 7.4e-30 134.0 98 64.3
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.3e-29 133.3 103 62.1
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 4.8e-29 131.3 118 55.9
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 8.2e-29 130.6 107 59.8
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 1.1e-28 130.2 107 59.8
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 1.1e-28 130.2 110 58.2
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 1.4e-28 129.8 120 56.7
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 1.8e-28 129.4 120 50.8
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.8e-28 129.4 99 63.6
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 1.8e-28 129.4 117 56.4
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 2.4e-28 129.0 111 62.2
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.5e-27 126.3 100 61.0
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 3.4e-27 125.2 118 55.1
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 5.8e-27 124.4 118 54.2
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 1.0e-26 123.6 119 54.6
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 1.7e-26 122.9 118 50.0
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 3.8e-26 121.7 111 55.9
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 7.2e-25 117.5 119 49.6
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 9.3e-25 117.1 119 49.6
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 9.3e-25 117.1 111 53.2
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 1.2e-24 116.7 117 50.4
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 2.1e-24 115.9 118 50.0
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 2.7e-24 115.5 112 52.7
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 6.1e-24 114.4 118 50.8
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 1.3e-23 113.2 99 61.6
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 3.9e-23 111.7 102 54.9
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 3.9e-23 111.7 118 50.0
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 3.9e-23 111.7 101 56.4
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 5.1e-23 111.3 98 53.1
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 6.7e-23 110.9 95 58.9
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 1.5e-22 109.8 96 58.3
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 1.5e-22 109.8 94 56.4
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 5.7e-22 107.8 95 54.7
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 1.6e-21 106.3 94 57.4
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 1.6e-21 106.3 96 51.0
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 2.8e-21 105.5 119 48.7
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 4.8e-21 104.8 117 49.6
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 6.3e-21 104.4 118 44.9
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 1.4e-20 103.2 94 54.3
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 1.8e-20 102.8 115 48.7
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.8e-20 102.8 117 48.7
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 2.4e-20 102.4 118 50.0
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 5.3e-20 101.3 118 46.6
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 1.2e-19 100.1 119 42.9
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 1.5e-19 99.8 116 50.0
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 2.0e-19 99.4 117 47.0
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 2.0e-19 99.4 117 47.0
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 2.0e-19 99.4 97 50.5
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 2.6e-19 99.0 115 47.0
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 2.6e-19 99.0 115 47.0
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 2.6e-19 99.0 117 41.0
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 3.4e-19 98.6 108 50.0
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 4.5e-19 98.2 93 46.2
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 5.9e-19 97.8 93 46.2
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 1.0e-18 97.1 116 48.3
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 1.3e-18 96.7 117 46.2
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 1.7e-18 96.3 115 46.1
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 2.9e-18 95.5 91 53.8
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 2.9e-18 95.5 91 53.8
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 2.9e-18 95.5 91 53.8
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 2.9e-18 95.5 91 53.8
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 6.5e-18 94.4 125 41.6
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 1.1e-17 93.6 119 43.7
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 2.5e-17 92.4 96 49.0
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 4.2e-17 91.7 98 43.9
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 7.2e-17 90.9 96 49.0
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.6e-16 89.7 83 54.2
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 2.1e-16 89.4 118 44.1
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 2.0e-14 82.8 113 43.4
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 4.3e-14 81.6 76 53.9
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 4.3e-14 81.6 81 49.4
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 4.3e-14 81.6 80 51.2
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 5.7e-14 81.3 115 43.5
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.2e-13 79.3 79 46.8
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 6.3e-13 77.8 90 42.2
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.8e-12 76.3 102 42.2
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.4e-12 75.9 79 44.3
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.4e-12 75.9 79 44.3
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 4.1e-12 75.1 63 60.3
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 2.0e-11 72.8 107 42.1
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 3.8e-10 68.6 73 46.6
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 2.5e-09 65.9 82 40.2
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 2.5e-09 65.9 89 41.6
arahy.Tifrunner.gnm1.ann1.65RZ9M Arachis hypogaea HOM05D007246 ORTHO05D009066 5.5e-09 64.7 69 53.6
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 1.8e-07 59.7 85 40.0
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 5.1e-07 58.2 75 40.0
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 5.1e-07 58.2 75 40.0
Lsat_1_v5_gn_4_16480 Lactuca sativa HOM05D007246 ORTHO05D009066 2.6e-06 55.8 36 63.9
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 3.3e-06 55.5 63 46.0


User provided reference genes

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