Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001649 Phaseolus vulgaris HOM05D007967 ORTHO05D008195 1.7e-48 195.7 97 100.0
Glyma.20G202000 Glycine max HOM05D007967 ORTHO05D008195 7.1e-31 137.1 100 74.0
Glyma.10G188700 Glycine max HOM05D007967 ORTHO05D008195 1.3e-29 132.9 99 70.7
Glyma.20G201900 Glycine max HOM05D007967 ORTHO05D008195 9.6e-28 126.7 101 70.3
Glyma.10G188900 Glycine max HOM05D007967 ORTHO05D008195 8.1e-27 123.6 101 70.3
Glyma.20G201800 Glycine max HOM05D007967 ORTHO05D008195 2.4e-26 122.1 101 66.3
Phvul.002G096366 Phaseolus vulgaris HOM05D007967 ORTHO05D008195 2.4e-23 112.1 97 63.9
Phvul.002G096432 Phaseolus vulgaris HOM05D007967 ORTHO05D008195 3.2e-23 111.7 99 60.6
VMungo0720G1177 Vigna mungo HOM05D007967 ORTHO05D008195 2.6e-17 92.0 81 60.5
Medtr1g073770 Medicago truncatula HOM05D007967 ORTHO05D008195 3.4e-17 91.7 98 56.1
Psat6g132560 Pisum sativum HOM05D007967 ORTHO05D008195 4.2e-15 84.7 96 49.0
Glyma.10G188800 Glycine max HOM05D007967 ORTHO05D008195 1.2e-14 83.2 69 69.6
FvH4_4g02960 Fragaria vesca HOM05D007967 ORTHO05D008195 6.7e-13 77.4 105 41.0
FAN12G4039 Fragaria x ananassa HOM05D007967 ORTHO05D008195 1.9e-12 75.9 105 40.0
FAN17G2965 Fragaria x ananassa HOM05D007967 ORTHO05D008195 3.3e-12 75.1 105 40.0
RcHm_v2.0_Chr4g0391021 Rosa chinensis HOM05D007967 ORTHO05D008195 1.6e-11 72.8 105 41.9
TPR.G28758 Trifolium pratense HOM05D007967 ORTHO05D008195 1.6e-11 72.8 65 55.4
FAN22G1743 Fragaria x ananassa HOM05D007967 ORTHO05D008195 2.2e-11 72.4 102 40.2
CiPaw.01G189400 Carya illinoinensis HOM05D007967 ORTHO05D008195 3.7e-11 71.6 108 43.5
TAR636G0109 Trochodendron aralioides HOM05D007967 ORTHO05D008195 4.8e-11 71.2 101 38.6
Lj6g0026326 Lotus japonicus HOM05D007967 ORTHO05D008195 8.2e-11 70.5 65 53.8
Medtr1g073780 Medicago truncatula HOM05D007967 ORTHO05D008195 8.2e-11 70.5 68 57.4
TAR362G0007 Trochodendron aralioides HOM05D007967 ORTHO05D008195 1.4e-10 69.7 100 43.0
FAN12G0154 Fragaria x ananassa HOM05D007967 ORTHO05D008195 1.5e-09 66.2 99 38.4
Medtr1g044470 Medicago truncatula HOM05D007967 ORTHO05D008195 5.9e-09 64.3 79 48.1
Glyma.10G008600 Glycine max HOM05D007967 ORTHO05D008195 1.7e-08 62.8 65 49.2
Prupe.1G033100 Prunus persica HOM05D007967 ORTHO05D008195 1.7e-08 62.8 102 41.2
Cfa008369 Carpinus fangiana HOM05D007967 ORTHO05D008195 2.2e-08 62.4 95 41.1
Cpa.g.sc44.111 Carica papaya HOM05D007967 ORTHO05D008195 5.0e-08 61.2 57 54.4
Ca_11940_v3 Cicer arietinum L. HOM05D007967 ORTHO05D008195 5.0e-08 61.2 79 43.0
TAR406G0009 Trochodendron aralioides HOM05D007967 ORTHO05D008195 5.0e-08 61.2 71 47.9
Atru.chr4.2184 Acer truncatum HOM05D007967 ORTHO05D008195 8.5e-08 60.5 99 41.4
Aqoxy5G00298 Aquilegia oxysepala HOM05D007967 ORTHO05D008195 8.5e-08 60.5 55 50.9
Ca_09811_v3 Cicer arietinum L. HOM05D007967 ORTHO05D008195 8.5e-08 60.5 56 57.1
Ca_30492_v3 Cicer arietinum L. HOM05D007967 ORTHO05D008195 8.5e-08 60.5 56 57.1
Manes.15G037400 Manihot esculenta HOM05D007967 ORTHO05D008195 1.1e-07 60.1 56 51.8
Potri.010G075100 Populus trichocarpa HOM05D007967 ORTHO05D008195 3.2e-07 58.5 102 44.1
Nn3g19573 Nelumbo nucifera HOM05D007967 ORTHO05D008195 5.5e-07 57.8 95 33.7
TPR.G26453 Trifolium pratense HOM05D007967 ORTHO05D008195 5.5e-07 57.8 60 53.3
QL06p015921 Quercus lobata HOM05D007967 ORTHO05D008195 7.2e-07 57.4 108 37.0
Cfa008371 Carpinus fangiana HOM05D007967 ORTHO05D008195 9.3e-07 57.0 88 40.9
TAR636G2334 Trochodendron aralioides HOM05D007967 ORTHO05D008195 2.1e-06 55.8 66 45.5
Rhsim04G0189300 Rhododendron simsii HOM05D007967 ORTHO05D008195 6.1e-06 54.3 81 38.3


User provided reference genes

Program Settings