Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 0.0e+00 1278.8 651 100.0
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 1.5e-297 1025.8 655 82.0
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 2.6e-262 908.7 657 74.4
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 1.6e-195 686.8 654 59.6
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 8.3e-176 621.3 658 56.2
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 8.3e-176 621.3 658 56.2
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 2.6e-169 599.7 652 53.8
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 1.2e-161 574.3 649 53.8
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.6e-158 563.9 657 52.1
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 2.1e-155 553.5 661 51.3
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 2.2e-104 384.0 725 38.6
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 5.0e-104 382.9 695 38.7
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 1.2e-102 378.3 695 37.8
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.0e-101 375.2 696 38.1
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 5.2e-101 372.9 734 39.1
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 5.7e-100 369.4 720 37.4
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 3.7e-99 366.7 691 38.9
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.1e-98 363.6 698 37.0
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 1.1e-95 355.1 709 37.2
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 1.1e-95 355.1 688 38.1
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 1.9e-95 354.4 706 39.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 2.5e-95 354.0 756 37.0
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 6.1e-94 349.4 716 36.3
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 8.0e-94 349.0 502 43.2
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 1.2e-92 345.1 711 37.7
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 4.4e-92 343.2 659 38.5
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 4.4e-92 343.2 636 39.3
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 2.2e-91 340.9 715 37.6
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 3.7e-91 340.1 651 38.2
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 4.1e-90 336.7 717 37.1
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.6e-89 334.7 740 35.1
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 1.6e-89 334.7 720 37.1
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.7e-88 331.3 712 35.7
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 1.7e-88 331.3 727 36.2
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 1.5e-87 328.2 330 54.5
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 2.5e-87 327.4 704 36.8
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 3.3e-87 327.0 682 37.5
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 4.2e-87 326.6 706 37.0
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 4.7e-86 323.2 794 34.0
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 8.0e-86 322.4 711 36.4
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.8e-85 321.2 617 37.9
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 6.8e-85 319.3 638 37.0
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 2.0e-84 317.8 617 38.2
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.3e-83 315.1 691 35.6
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 4.9e-83 313.2 615 37.6
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 1.8e-82 311.2 672 35.9
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 1.6e-81 308.1 376 54.0
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 2.0e-81 307.8 542 38.7
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.7e-81 307.4 523 38.6
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 3.5e-81 307.0 656 34.9
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 1.0e-80 305.4 631 38.2
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 2.9e-80 303.9 561 37.6
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 3.8e-80 303.5 676 36.4
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 6.6e-80 302.8 681 36.7
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 8.6e-80 302.4 701 34.4
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.5e-79 301.6 552 37.7
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 1.9e-79 301.2 511 40.9
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 3.3e-79 300.4 721 35.0
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 3.3e-79 300.4 604 36.1
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 2.8e-78 297.4 673 36.7
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 2.8e-78 297.4 681 35.8
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 3.6e-78 297.0 687 34.9
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 8.0e-78 295.8 682 35.9
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 2.3e-77 294.3 474 42.0
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 4.0e-77 293.5 682 35.8
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 5.2e-77 293.1 633 35.9
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.2e-76 292.0 725 34.3
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 1.3e-75 288.5 699 34.0
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.2e-75 287.7 693 35.2
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 1.1e-74 285.4 665 35.2
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 1.9e-74 284.6 748 33.3
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 2.4e-74 284.3 754 31.8
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 5.4e-74 283.1 654 34.1
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 3.5e-73 280.4 655 33.6
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 3.0e-72 277.3 625 35.2
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 6.6e-72 276.2 709 33.1
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 6.6e-72 276.2 696 33.5
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 6.2e-70 269.6 563 35.3
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 1.4e-69 268.5 644 32.9
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 3.4e-68 263.8 473 37.2
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.5e-65 253.8 392 40.8
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 2.3e-64 251.1 384 42.2
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 4.3e-63 246.9 670 33.4
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 2.8e-62 244.2 855 29.9
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 3.6e-62 243.8 511 36.0
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.0e-61 240.4 530 34.5
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 6.8e-61 239.6 425 39.3
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 6.0e-57 226.5 489 34.2
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 2.3e-56 224.6 298 47.3
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 5.4e-50 203.4 423 34.8
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 7.8e-49 199.5 692 30.9
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 4.0e-45 187.2 364 36.8
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 2.0e-44 184.9 588 31.0
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.9e-43 181.0 532 30.8
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 1.4e-42 178.7 423 37.6
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 1.9e-42 178.3 409 34.0
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 5.1e-40 170.2 584 28.1
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 2.5e-39 167.9 363 34.7
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 5.6e-39 166.8 372 33.3
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 5.3e-37 160.2 379 37.5
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 2.6e-36 157.9 334 37.1
TPR.G14651 Trifolium pratense HOM05D006063 ORTHO05D000023 4.5e-36 157.1 237 48.5
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 7.6e-36 156.4 281 39.9
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 4.2e-34 150.6 718 24.7
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 2.7e-33 147.9 182 47.3
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 3.1e-29 134.4 349 35.8
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 4.2e-26 124.0 246 36.2
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 6.0e-25 120.2 358 33.0
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 8.2e-22 109.8 366 29.2
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 2.4e-21 108.2 134 51.5
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.5e-20 105.5 239 34.3
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 4.2e-18 97.4 264 34.1
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 3.9e-16 90.9 107 48.6
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 9.0e-13 79.7 287 30.7
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 2.2e-11 75.1 154 37.0
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 4.2e-10 70.9 137 30.7
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 7.2e-10 70.1 121 38.8
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 5.1e-08 63.9 48 68.8
Cpa.g.sc51.64 Carica papaya HOM05D006063 ORTHO05D000023 8.2e-06 56.6 110 40.0


User provided reference genes

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