Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001645 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 6.3e-24 113.6 73 100.0
Phvul.L001745 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 6.3e-24 113.6 73 100.0
Glyma.14G093100 Glycine max HOM05D002160 ORTHO05D002012 3.2e-15 84.7 74 70.3
Glyma.17G230500 Glycine max HOM05D002160 ORTHO05D002012 1.2e-14 82.8 74 68.9
Medtr4g021730 Medicago truncatula HOM05D002160 ORTHO05D002012 1.9e-12 75.5 74 66.2
Psat7g239160 Pisum sativum HOM05D002160 ORTHO05D002012 3.3e-12 74.7 74 64.9
Ca_03760_v3 Cicer arietinum L. HOM05D002160 ORTHO05D002012 7.3e-12 73.6 75 65.3
Medtr4g021725 Medicago truncatula HOM05D002160 ORTHO05D002012 8.0e-11 70.1 74 62.2
Lj3g0006632 Lotus japonicus HOM05D002160 ORTHO05D002012 1.0e-10 69.7 74 74.3
Glyma.03G082100 Glycine max HOM05D002160 ORTHO05D002012 2.3e-10 68.6 74 74.3
Ca_03759_v3 Cicer arietinum L. HOM05D002160 ORTHO05D002012 5.2e-10 67.4 75 64.0
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.2e-09 66.2 71 56.3
TPR.G5610 Trifolium pratense HOM05D002160 ORTHO05D002012 3.7e-08 61.2 68 63.2
arahy.Tifrunner.gnm1.ann1.N3YTXC Arachis hypogaea HOM05D002160 ORTHO05D002012 4.9e-08 60.8 80 56.2
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 1.1e-07 59.7 52 57.7
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 1.1e-07 59.7 52 57.7
SalBow3G1804 Salvia bowleyana HOM05D002160 ORTHO05D002012 1.1e-07 59.7 72 55.6
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 1.4e-07 59.3 51 56.9
Lalb_Chr12g0210241 Lupinus albus HOM05D002160 ORTHO05D002012 1.9e-07 58.9 72 59.7
arahy.Tifrunner.gnm1.ann1.SS44WU Arachis hypogaea HOM05D002160 ORTHO05D002012 5.4e-07 57.4 81 55.6
Ca_07544_v3 Cicer arietinum L. HOM05D002160 ORTHO05D002012 7.0e-07 57.0 51 54.9
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 9.2e-07 56.6 72 54.2
arahy.Tifrunner.gnm1.ann1.02J1VT Arachis hypogaea HOM05D002160 ORTHO05D002012 1.2e-06 56.2 52 57.7
arahy.Tifrunner.gnm1.ann1.8X9BUY Arachis hypogaea HOM05D002160 ORTHO05D002012 1.2e-06 56.2 52 57.7
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 1.2e-06 56.2 42 59.5
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 1.2e-06 56.2 42 59.5
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 1.6e-06 55.8 51 58.8
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.6e-06 55.8 74 43.2
Dinv35604 Davidia involucrata HOM05D002160 ORTHO05D002012 2.0e-06 55.5 51 52.9
Glyma.18G180800 Glycine max HOM05D002160 ORTHO05D002012 2.7e-06 55.1 51 54.9
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 3.5e-06 54.7 51 52.9
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 6.0e-06 53.9 50 50.0


User provided reference genes

Program Settings