Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001634 Phaseolus vulgaris HOM05D000871 ORTHO05D050281 1.2e-39 166.0 84 100.0
VMungo1309G3053 Vigna mungo HOM05D000871 ORTHO05D050281 3.9e-33 144.4 82 87.8
VMungo0464G2141 Vigna mungo HOM05D000871 ORTHO05D000770 3.1e-30 134.8 82 82.9
Glyma.06G049500 Glycine max HOM05D000871 ORTHO05D000770 5.0e-25 117.5 81 72.8
Glyma.04G048200 Glycine max HOM05D000871 ORTHO05D000770 5.6e-24 114.0 81 69.1
Lalb_Chr24g0399531 Lupinus albus HOM05D000871 ORTHO05D000770 7.3e-16 87.0 81 53.1
Lj5g0009397 Lotus japonicus HOM05D000871 ORTHO05D000770 6.2e-15 84.0 81 56.8
Lalb_Chr14g0367991 Lupinus albus HOM05D000871 ORTHO05D000770 8.1e-15 83.6 81 54.3
Psat5g042360 Pisum sativum HOM05D000871 ORTHO05D000770 8.1e-15 83.6 81 54.3
Lj1g0019713 Lotus japonicus HOM05D000871 ORTHO05D000770 1.1e-14 83.2 81 50.6
Medtr3g103510 Medicago truncatula HOM05D000871 ORTHO05D000770 1.1e-14 83.2 81 54.3
Glyma.14G090400 Glycine max HOM05D000871 ORTHO05D000770 2.4e-14 82.0 81 50.6
Glyma.17G232255 Glycine max HOM05D000871 ORTHO05D000770 8.9e-14 80.1 81 49.4
Ca_15884_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 1.2e-13 79.7 77 53.2
arahy.Tifrunner.gnm1.ann1.D0CGVG Arachis hypogaea HOM05D000871 ORTHO05D000770 9.9e-13 76.6 84 53.6
VMungo0647G0076 Vigna mungo HOM05D000871 ORTHO05D000770 2.2e-12 75.5 84 46.4
Psat6g018480 Pisum sativum HOM05D000871 ORTHO05D000770 3.8e-12 74.7 81 48.1
Phvul.001G031600 Phaseolus vulgaris HOM05D000871 ORTHO05D000770 4.9e-12 74.3 83 47.0
arahy.Tifrunner.gnm1.ann1.J84JDI Arachis hypogaea HOM05D000871 ORTHO05D000770 8.4e-12 73.6 84 52.4
CANSAT25G0142 Cannabis sativa HOM05D000871 ORTHO05D000770 1.6e-10 69.3 82 50.0
Medtr1g017270 Medicago truncatula HOM05D000871 ORTHO05D000770 2.1e-10 68.9 80 46.2
Ca_06988_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 2.7e-10 68.6 80 46.2
CsaV3_4G035350 Cucumis sativus L. HOM05D000871 ORTHO05D000770 5.1e-09 64.3 81 46.9
Cfa013726 Carpinus fangiana HOM05D000871 ORTHO05D000770 6.6e-09 63.9 82 47.6
MD08G1076800 Malus domestica HOM05D000871 ORTHO05D000770 6.6e-09 63.9 83 47.0
TPR.G13046 Trifolium pratense HOM05D000871 ORTHO05D000770 1.5e-08 62.8 81 42.0
ClCG05G017620 Citrullus lanatus HOM05D000871 ORTHO05D000770 1.9e-08 62.4 81 46.9
MELO3C016845.2 Cucumis melo HOM05D000871 ORTHO05D000770 2.5e-08 62.0 81 45.7
ClCG08G016750 Citrullus lanatus HOM05D000871 ORTHO05D000770 4.3e-08 61.2 84 44.0
Haze_22373 Corylus avellana HOM05D000871 ORTHO05D000770 5.6e-08 60.8 82 45.1
CsaV3_2G025870 Cucumis sativus L. HOM05D000871 ORTHO05D000770 7.3e-08 60.5 84 45.2
Prupe.1G418100 Prunus persica HOM05D000871 ORTHO05D000770 7.3e-08 60.5 82 43.9
GSVIVG01009287001 Vitis vinifera HOM05D000871 ORTHO05D000770 9.6e-08 60.1 81 45.7
Gohir.A05G212500 Gossypium hirsutum HOM05D000871 ORTHO05D000770 1.2e-07 59.7 83 47.0
Gohir.D05G215700 Gossypium hirsutum HOM05D000871 ORTHO05D000770 1.2e-07 59.7 82 43.9
QL09p016092 Quercus lobata HOM05D000871 ORTHO05D000770 1.2e-07 59.7 81 49.4
Duzib041G0102 Durio zibethinus HOM05D000871 ORTHO05D000770 1.6e-07 59.3 82 43.9
Gorai.009G222400 Gossypium raimondii HOM05D000871 ORTHO05D000770 1.6e-07 59.3 82 43.9
MD15G1064100 Malus domestica HOM05D000871 ORTHO05D000770 1.6e-07 59.3 84 45.2
Manes.05G184200 Manihot esculenta HOM05D000871 ORTHO05D000770 2.8e-07 58.5 86 43.0
TWI12G1432 Tripterygium wilfordii HOM05D000871 ORTHO05D000770 2.8e-07 58.5 83 44.6
CiPaw.08G053100 Carya illinoinensis HOM05D000871 ORTHO05D000770 3.6e-07 58.2 83 45.8
Duzib093G1756 Durio zibethinus HOM05D000871 ORTHO05D000770 6.2e-07 57.4 82 41.5
PGR083G1760 Punica granatum HOM05D000871 ORTHO05D000770 6.2e-07 57.4 81 45.7
Actinidia10230 Actinidia chinensis HOM05D000871 ORTHO05D000770 8.1e-07 57.0 82 45.1
Thecc.08G083200 Theobroma cacao HOM05D000871 ORTHO05D000770 8.1e-07 57.0 84 42.9
MELO3C010781.2 Cucumis melo HOM05D000871 ORTHO05D000770 1.4e-06 56.2 84 42.9
Gohir.A01G124100 Gossypium hirsutum HOM05D000871 ORTHO05D000770 1.4e-06 56.2 81 42.0
Gorai.002G136800 Gossypium raimondii HOM05D000871 ORTHO05D000770 1.4e-06 56.2 81 42.0
CiPaw.07G171100 Carya illinoinensis HOM05D000871 ORTHO05D000770 2.4e-06 55.5 82 45.1
FAN20G2793 Fragaria x ananassa HOM05D000871 ORTHO05D000770 2.4e-06 55.5 84 40.5
Duzib116G0530 Durio zibethinus HOM05D000871 ORTHO05D000770 4.0e-06 54.7 86 43.0
Gohir.D01G111900 Gossypium hirsutum HOM05D000871 ORTHO05D000770 4.0e-06 54.7 81 40.7
Sed0014007 Sechium edule HOM05D000871 ORTHO05D000770 4.0e-06 54.7 83 38.6
TWI56G0882 Tripterygium wilfordii HOM05D000871 ORTHO05D000770 5.2e-06 54.3 86 43.0
Dinv44925 Davidia involucrata HOM05D000871 ORTHO05D000770 9.0e-06 53.5 82 42.7


User provided reference genes

Program Settings