Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 5.4e-53 210.7 104 100.0
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 1.3e-46 189.5 104 90.4
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 7.1e-45 183.7 103 88.3
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 1.8e-40 169.1 104 79.8
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.5e-39 166.0 91 90.1
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.7e-38 162.5 104 76.9
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 3.2e-37 158.3 104 74.0
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 6.0e-36 154.1 103 77.7
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 6.0e-36 154.1 104 74.0
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.3e-35 152.9 103 72.8
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 2.3e-35 152.1 103 71.8
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 5.1e-35 151.0 103 72.8
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.1e-34 149.8 101 71.3
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 5.6e-34 147.5 102 71.6
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 7.4e-34 147.1 102 70.6
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 9.6e-34 146.7 100 71.0
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 9.6e-34 146.7 103 69.9
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.6e-33 146.0 97 75.3
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.6e-33 146.0 103 69.9
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 2.1e-33 145.6 100 72.0
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.8e-33 145.2 102 70.6
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 3.7e-33 144.8 103 67.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 3.7e-33 144.8 103 67.0
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 4.8e-33 144.4 101 69.3
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 6.2e-33 144.1 99 70.7
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 8.1e-33 143.7 104 67.3
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 8.1e-33 143.7 103 64.1
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-32 143.3 102 69.6
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.1e-32 143.3 103 67.0
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.4e-32 142.9 100 71.0
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.8e-32 142.5 105 70.5
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 1.8e-32 142.5 87 79.3
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 2.4e-32 142.1 92 75.0
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 3.1e-32 141.7 101 67.3
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 4.0e-32 141.4 100 71.0
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 4.0e-32 141.4 101 69.3
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 9.0e-32 140.2 100 69.0
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 9.0e-32 140.2 100 69.0
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 9.0e-32 140.2 100 69.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 9.0e-32 140.2 101 67.3
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.2e-31 139.8 98 66.3
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 1.2e-31 139.8 105 69.5
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.0e-31 139.0 97 66.0
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 2.0e-31 139.0 100 67.0
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 3.4e-31 138.3 99 66.7
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 3.4e-31 138.3 87 75.9
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 4.5e-31 137.9 103 64.1
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 7.6e-31 137.1 100 66.0
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.0e-30 136.7 102 66.7
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 1.0e-30 136.7 97 68.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.7e-30 136.0 103 63.1
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 1.7e-30 136.0 99 67.7
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 2.2e-30 135.6 103 64.1
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 3.8e-30 134.8 101 65.3
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 3.8e-30 134.8 98 69.4
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 4.9e-30 134.4 100 66.0
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 6.5e-30 134.0 84 75.0
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 6.5e-30 134.0 84 75.0
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 6.5e-30 134.0 84 75.0
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.1e-29 133.3 104 63.5
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.4e-29 132.9 85 74.1
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 1.9e-29 132.5 86 72.1
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.9e-29 132.5 100 67.0
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 2.5e-29 132.1 104 63.5
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 3.2e-29 131.7 83 75.9
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 4.2e-29 131.3 104 62.5
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 5.5e-29 131.0 83 77.1
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 9.3e-29 130.2 88 71.6
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 1.2e-28 129.8 96 66.7
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 1.2e-28 129.8 104 62.5
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 1.6e-28 129.4 95 68.4
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 2.1e-28 129.0 104 60.6
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 4.6e-28 127.9 83 73.5
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 6.0e-28 127.5 83 73.5
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.3e-27 126.3 89 68.5
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 1.8e-27 125.9 84 69.0
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 2.3e-27 125.6 82 69.5
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 3.0e-27 125.2 100 62.0
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 5.1e-27 124.4 104 57.7
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 5.1e-27 124.4 94 62.8
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 6.7e-27 124.0 103 58.3
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 8.7e-27 123.6 78 71.8
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.1e-26 123.2 101 60.4
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 1.1e-26 123.2 103 61.2
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 1.5e-26 122.9 84 67.9
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 2.5e-26 122.1 100 61.0
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 3.3e-26 121.7 93 68.8
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 4.3e-26 121.3 85 65.9
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 5.7e-26 120.9 87 63.2
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 5.7e-26 120.9 87 63.2
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 5.7e-26 120.9 87 63.2
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 5.7e-26 120.9 87 63.2
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 5.7e-26 120.9 87 63.2
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 5.7e-26 120.9 82 67.1
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.3e-25 119.8 103 55.3
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 2.1e-25 119.0 103 57.3
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 5.3e-24 114.4 104 55.8
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 2.6e-23 112.1 98 58.2
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 2.6e-23 112.1 80 65.0
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 4.5e-23 111.3 80 65.0
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 1.0e-22 110.2 77 68.8
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 1.7e-22 109.4 84 60.7
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 5.5e-21 104.4 82 57.3
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.2e-20 103.2 82 56.1
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 7.9e-20 100.5 82 58.5
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 2.3e-19 99.0 87 50.6
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.5e-18 95.5 81 51.9
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 2.5e-18 95.5 63 73.0
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 1.6e-17 92.8 82 57.3
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.7e-14 82.8 70 55.7
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 3.6e-12 75.1 84 40.5
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 2.3e-11 72.4 82 40.2
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 1.5e-10 69.7 85 42.4
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 2.8e-09 65.5 80 38.8
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 1.2e-07 60.1 92 39.1


User provided reference genes

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