Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 0.0e+00 1249.6 632 100.0
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 1.9e-254 882.5 647 74.5
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 8.2e-237 823.9 494 86.8
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 4.1e-236 821.6 645 72.2
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 3.9e-170 602.4 633 60.0
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 9.3e-148 528.1 610 56.7
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 5.7e-137 492.3 545 56.0
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.7e-101 374.4 597 47.4
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 6.5e-101 372.5 649 44.4
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 2.8e-91 340.5 648 42.0
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 2.3e-85 320.9 625 41.6
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 5.8e-81 306.2 654 38.2
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.8e-74 284.6 650 36.9
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 2.9e-72 277.3 673 39.2
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 6.0e-70 269.6 611 36.3
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 1.1e-66 258.8 595 38.7
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 5.2e-66 256.5 649 37.3
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 8.9e-66 255.8 515 38.6
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 7.6e-65 252.7 657 36.5
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 1.7e-64 251.5 508 39.8
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 2.4e-63 247.7 658 36.2
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 5.4e-63 246.5 613 36.9
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 1.0e-61 242.3 567 38.8
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.6e-59 235.0 659 36.1
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 3.2e-55 220.7 654 36.2
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 5.4e-55 219.9 648 35.0
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 6.0e-54 216.5 592 35.3
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 5.1e-53 213.4 544 35.5
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 5.6e-52 209.9 614 34.9
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 7.3e-52 209.5 363 45.5
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 4.0e-50 203.8 592 35.3
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 1.2e-49 202.2 603 34.7
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.6e-46 191.8 427 37.2
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 3.5e-46 190.7 539 35.1
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 3.0e-45 187.6 522 33.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 3.9e-45 187.2 479 37.0
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 5.1e-45 186.8 510 35.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 8.7e-45 186.0 587 34.8
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 2.1e-43 181.4 445 36.0
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 3.7e-43 180.6 443 36.8
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 6.2e-43 179.9 606 33.5
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 1.4e-42 178.7 467 35.8
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.8e-42 178.3 451 36.1
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.1e-42 177.6 630 33.0
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 9.0e-42 176.0 488 34.0
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 5.8e-41 173.3 632 32.0
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 2.2e-40 171.4 655 31.0
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 2.2e-40 171.4 479 35.5
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 6.4e-40 169.9 565 35.2
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.4e-39 168.7 676 30.9
Psat1g013640 Pisum sativum HOM05D006718 ORTHO05D008492 1.9e-39 168.3 366 41.3
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 3.2e-39 167.5 457 35.9
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.0e-37 162.5 418 35.4
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 5.1e-37 160.2 415 35.4
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 6.7e-37 159.8 617 32.7
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.5e-36 158.7 320 38.4
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.9e-36 158.3 496 34.3
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.9e-36 158.3 456 35.3
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.5e-36 157.9 591 31.8
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 5.6e-36 156.8 588 32.3
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 7.4e-36 156.4 456 35.3
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 7.4e-36 156.4 709 29.6
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 9.6e-36 156.0 625 32.5
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 3.7e-35 154.1 446 34.1
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.1e-34 152.5 665 30.4
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 4.0e-34 150.6 536 32.1
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 9.0e-34 149.4 564 33.5
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 1.5e-33 148.7 425 35.1
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.5e-33 148.7 314 42.4
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 5.8e-33 146.7 535 31.8
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.0e-32 146.0 505 33.7
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.0e-32 146.0 660 30.2
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.7e-32 145.2 509 33.2
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 3.8e-32 144.1 565 32.9
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 8.4e-32 142.9 201 45.3
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 8.4e-32 142.9 224 43.8
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.1e-31 142.5 650 30.9
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.4e-31 142.1 452 33.8
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.4e-31 142.1 386 36.0
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.9e-31 141.7 236 40.7
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 2.5e-31 141.4 216 46.8
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.5e-31 141.4 681 29.8
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 3.2e-31 141.0 613 30.5
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.1e-30 138.3 532 30.8
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 3.5e-30 137.5 620 30.2
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.8e-29 135.2 575 28.7
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 3.0e-29 134.4 565 29.9
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 8.7e-29 132.9 639 29.0
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 4.8e-27 127.1 647 29.1
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 8.2e-27 126.3 422 34.6
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.8e-26 125.2 431 32.3
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.5e-25 122.1 223 43.0
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 4.5e-25 120.6 470 32.3
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.7e-24 118.6 455 31.9
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 3.8e-24 117.5 429 32.9
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 5.0e-24 117.1 656 30.2
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 5.0e-24 117.1 491 31.4
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 1.9e-23 115.2 268 36.2
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 1.2e-22 112.5 228 37.7
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 1.4e-21 109.0 207 36.2
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.3e-21 108.2 612 26.5
Psat2g067120 Pisum sativum HOM05D006718 ORTHO05D008492 2.0e-17 95.1 99 59.6
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 3.8e-16 90.9 383 31.1
Psat2g100040 Pisum sativum HOM05D006718 ORTHO05D008492 3.6e-14 84.3 136 41.2
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 3.0e-13 81.3 310 33.5
Psat0s1639g0200 Pisum sativum HOM05D006718 ORTHO05D008492 4.8e-11 73.9 91 50.5
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 5.9e-09 67.0 192 29.7


User provided reference genes

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