Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 2.7e-147 525.4 285 100.0
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 7.7e-118 427.6 326 76.4
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 3.6e-99 365.5 267 76.4
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 2.3e-90 336.3 284 65.5
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 2.6e-89 332.8 291 66.0
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 2.7e-86 322.8 285 65.6
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.7e-80 303.5 333 53.8
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 2.2e-80 303.1 283 58.0
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 1.4e-79 300.4 283 57.6
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 7.1e-79 298.1 283 58.7
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 6.0e-78 295.0 287 57.1
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 1.3e-77 293.9 282 56.7
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 1.8e-74 283.5 283 53.7
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 6.9e-74 281.6 282 56.4
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 3.4e-73 279.3 282 55.7
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 3.8e-72 275.8 302 57.3
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 3.8e-72 275.8 302 57.3
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 1.1e-71 274.2 273 56.8
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 7.1e-71 271.6 283 55.1
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 1.2e-70 270.8 283 53.0
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 2.7e-70 269.6 283 55.5
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 7.8e-70 268.1 283 53.7
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 3.9e-69 265.8 283 53.4
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 3.9e-69 265.8 283 51.6
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.9e-69 265.8 283 51.6
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.5e-68 263.8 283 51.9
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 1.5e-68 263.8 284 53.9
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 9.6e-68 261.2 264 54.2
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 6.2e-67 258.5 277 54.5
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 3.1e-66 256.1 280 53.6
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 2.9e-64 249.6 280 51.4
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.1e-63 247.7 291 48.5
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 4.2e-63 245.7 282 50.7
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 4.2e-63 245.7 285 52.6
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.2e-62 244.2 289 48.8
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 2.1e-62 243.4 284 47.2
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 3.5e-62 242.7 272 52.2
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 6.0e-62 241.9 281 49.5
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 8.7e-61 238.0 280 47.1
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 1.1e-60 237.7 283 49.1
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.9e-60 236.9 281 49.1
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 4.3e-60 235.7 283 48.8
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 7.4e-60 235.0 276 47.5
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 4.8e-59 232.3 282 48.9
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.8e-58 230.3 282 47.5
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 4.0e-58 229.2 283 47.3
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 3.4e-57 226.1 282 47.2
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 7.6e-57 224.9 282 46.8
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 1.7e-56 223.8 283 47.3
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 1.7e-56 223.8 283 46.6
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 7.1e-55 218.4 270 47.8
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 9.3e-55 218.0 276 45.3
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 1.6e-54 217.2 297 44.4
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 1.6e-54 217.2 283 44.5
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 4.6e-54 215.7 307 43.6
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.0e-53 214.5 283 46.6
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 3.9e-53 212.6 350 41.4
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 5.1e-53 212.2 307 43.3
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 6.7e-53 211.8 284 42.6
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 1.1e-52 211.1 283 43.8
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.6e-51 207.2 283 45.6
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 8.2e-51 204.9 263 45.6
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 1.8e-50 203.8 291 41.9
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.2e-49 201.1 312 42.0
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 1.3e-48 197.6 289 43.9
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 4.2e-47 192.6 331 38.4
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 9.3e-47 191.4 280 42.1
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.2e-46 191.0 266 42.5
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 3.3e-44 183.0 319 38.9
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 9.7e-44 181.4 210 51.0
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 3.7e-43 179.5 129 72.1
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.1e-42 177.9 224 47.3
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.3e-42 175.6 224 46.9
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.3e-42 175.6 168 57.7
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 6.9e-42 175.3 281 39.9
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 4.5e-41 172.6 128 71.9
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 7.7e-41 171.8 282 40.8
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 7.7e-41 171.8 128 72.7
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 4.2e-39 166.0 291 36.8
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 7.9e-38 161.8 282 36.9
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 1.5e-36 157.5 248 41.9
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 2.5e-36 156.8 340 36.5
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 5.7e-36 155.6 128 65.6
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 7.4e-36 155.2 116 69.8
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.7e-35 154.1 214 46.3
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 4.8e-35 152.5 113 69.0
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.0e-33 147.1 234 39.7
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.6e-33 146.7 125 60.8
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 6.5e-32 142.1 283 34.6
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 6.5e-32 142.1 211 39.8
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 8.5e-32 141.7 203 44.8
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 7.2e-31 138.7 142 56.3
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 7.9e-30 135.2 165 49.1
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 2.8e-27 126.7 236 36.9
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 4.8e-27 125.9 263 37.3
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 4.8e-27 125.9 283 30.4
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 1.8e-26 124.0 200 37.0
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 5.3e-26 122.5 148 50.0
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 7.0e-26 122.1 280 35.4
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 1.5e-25 120.9 111 61.3
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 1.1e-23 114.8 194 37.6
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.1e-23 114.8 269 31.6
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 4.2e-23 112.8 106 54.7
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 4.2e-23 112.8 209 36.8
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 2.7e-22 110.2 147 44.2
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 8.8e-21 105.1 112 51.8
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.1e-18 98.2 283 28.3
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 9.1e-18 95.1 162 40.1
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 4.5e-17 92.8 99 46.5
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 6.5e-16 89.0 84 54.8
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 3.6e-14 83.2 99 45.5
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 8.8e-13 78.6 130 39.2
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 8.8e-13 78.6 48 87.5
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 3.7e-11 73.2 80 47.5
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.8e-10 70.9 52 61.5
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 3.1e-10 70.1 63 55.6
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 3.5e-09 66.6 125 28.8
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 3.8e-08 63.2 55 60.0
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 5.5e-07 59.3 56 50.0
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 4.7e-06 56.2 109 35.8


User provided reference genes

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